Cobetia amphilecti: LCW13_00905
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Entry
LCW13_00905 CDS
T07922
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
camh
Cobetia amphilecti
Pathway
camh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LCW13_00905 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
camh03019
]
LCW13_00905 (pcnB)
Enzymes [BR:
camh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
LCW13_00905 (pcnB)
Messenger RNA biogenesis [BR:
camh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LCW13_00905 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
UBU48887
LinkDB
All DBs
Position
complement(199957..201357)
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AA seq
466 aa
AA seq
DB search
MLKGFTRFLQRPGDRLKTLFNATDAPAAPLPSLRVIPRDEHPVSRRQLSENALKVLYRLQ
SGGYQAYLVGGCIRDALLGQRPKDFDVATNATPEQVRELFRNARIIGRRFRIVHVRFGRE
VIEVTTFRGKPADSTPSQHTQQSEDGMLLRDNVFGSIEEDALRRDFTINALYYDVSDFTI
HDWANGVRDIEARMIRLIGDPETRYREDPVRMLRAVRFAGKLDFDIEEATAEPMYELAPL
LLQIPPARMFEEVLKLFMSGYALETFHLLREFGLFQMLFPETEESFAHYHWSMPLIEKAL
ASTDDRIREDKPVTPAFLYAALLWPGVKARTDQLIASGMPDIPAAHQAAQQAIARQLNHT
SIPKRFSIPMREIWDMQAKLPRRRGKRAFQTREHPRFRAAYDFLLLREFAGEVKPGLGKW
WTDFQEVDALTQVTMIEGVSDEGPAGSKPVGTKRRGKRRRNGRGQG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaaggatttacccgctttctacaacgccccggtgaccgcttgaagacgcttttc
aatgcaactgacgcgcccgcggccccattgcccagcctgcgtgtgataccgcgggatgaa
catcccgtgtcccgccgccagctcagcgagaatgcgctgaaggtactctatcgcctgcaa
agcggtggatatcaggcctatctggtcggtggctgtatccgtgatgccctgctcgggcaa
cgccccaaggacttcgacgtggccaccaacgccacgccggaacaggtccgcgagctgttc
cgcaatgcccgcatcatcggccgtcgtttccgtatcgtgcacgtgcgcttcggtcgtgag
gtgatcgaggtcaccaccttccgcggcaagccggccgatagcacgcccagccagcatacc
cagcagtcggaagatggcatgctgctgcgcgacaacgtcttcggctccatcgaggaggac
gcgctgcgccgcgacttcacgatcaatgccctctattacgacgtgtccgacttcacgatc
cacgactgggccaatggtgtacgcgatatcgaagcgcgcatgattcgcctgatcggtgat
ccggaaacacgctatcgcgaagacccggtgcgcatgctgcgtgccgtccgcttcgccggc
aagctggacttcgacatcgaggaggccacggccgaaccgatgtacgaactggccccgctg
ctgctgcagattccgccggcgcgcatgttcgaggaagtgctcaagctgttcatgtccggc
tatgcactggaaaccttccatctcctgcgtgagtttggtctgttccagatgctgttcccc
gagacggaagagagcttcgcgcattatcactggtccatgccgctgatcgagaaggcgctg
gccagcacggacgaccgcatccgcgaagacaagccggtcacgccggccttcctgtatgcc
gccctgctgtggccgggcgtcaaggcgcgtaccgaccagctgatcgccagtggcatgccc
gatattccggcagcccaccaggcggctcagcaggcgatcgctcgccagctcaaccacacc
tcgatcccgaagcgcttcagcattccgatgcgcgagatctgggacatgcaggccaagttg
ccgcgtcgccgtggcaagcgcgccttccagacccgcgagcatccgcgcttccgcgccgcc
tacgacttcctgctgctgcgcgaattcgccggcgaagtgaagccggggctgggcaagtgg
tggaccgacttccaggaagtcgatgctctcacccaggtcacgatgatcgaaggtgtctcc
gatgaaggccccgccggcagcaagccggtcggcaccaagcgtcgcggcaagcgtcggcgc
aatggtcgcggccagggctga
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