Cobetia amphilecti: LCW13_01960
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Entry
LCW13_01960 CDS
T07922
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
camh
Cobetia amphilecti
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
camh03036
]
LCW13_01960 (smc)
Chromosome and associated proteins [BR:
camh03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
LCW13_01960 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
AAA_23
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UBU49067
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Position
426155..429676
Genome browser
AA seq
1173 aa
AA seq
DB search
MRLKSIKLVGFKSFVDPVTVPFDSNMTAILGPNGCGKSNVIDAVRWVMGESSAKNLRGES
MTDVIFNGSTGRKPVGQASIELTFDNADGSLGGAWSEYAEIAVKRLVTRDGQSGYFLNGQ
KCRRRDIADVFLGTGLGPRSYSIIGQGMISQLIEARPDDLRSTLEEAAGISKYKERRRET
ENRMKRTQENMERLDDLREELDKQLERLKRQAEAAKRYQTLKQDEYRLKGELAVLRRRGL
RAQQREQQSRVAELETGVEREILGQRQCESQLEEQRYQHDELAGELETHQAAFYETGAQI
ARIEQSLEHARTREQQLAADLEMARRELSDIQRVEGEDGERLEMIDARLEDIAPELELAR
ETLDGLELSLDEAEERRQDSQSEWERFSQADNESQRGAERAQSEIQQLENAIADAERQRE
RRRQQLAELPDVAELREAREELREQLDELSLSGESLESRREQASEAREQAQADRLALDGE
RDQLRQRRNVLQGEKASLEALIDAALRDDDDSLASHLEQHGLAETPALAEGLEVAEGWES
ASAWVLGPFLKARLAASEPSRLATLMDELPGGELLLVDGTPASSAAARPAGTLAAQVSGA
DALAGWLASIHCVESQAAAWARRDSLAAHESVLTPDGLWLGQGWSRRQVAGERADSVIAQ
RARLEQVVLELESLDERLEEIETRLAAAAEQIAGAEQQLEHLRVEERELGERQRELSLKE
AGIASRLEHVDGRARELDEELEQLAETRETQALTLEEARERWQQALEAVENNAQSRESLE
RSRREHQEALAGLRAQLAPAREQVNRLDMECQRLTTERDGMQGQRMRAVEQREKLTERIE
MLEASREEASLPQEEEREKLEMLLETRLYQETKLNACRDKTHELVEQMRQAEQSRQTHER
NLEGIRQRLEEGRMQVQALTLKGDAQDEQLVELGYDEAAITQLEDELDPNATESAWSHNL
EQIGERIKRLGAINLAAIEEYDQQAERRNYLEAQHAELSEALETLERAIRKIDQETRVRF
KDTFDKVNAGIQALFPKIFGGGAAWLTLTGDDLLETGVAIMARPPGKKNSTIHLLSGGEK
ALTALALVFAIFQLNPAPFCMLDEVDAPLDDANVGRYARLVKEMSESVQFIYITHNKIAM
EAADRLMGVTMQEPGVSRLVSVGIEEAAVLAEA
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcaaatcgatcaagctggtcggcttcaaatccttcgtcgatccggtcaccgtg
cccttcgacagcaacatgacggcgattctcggccccaacggctgtgggaaatcgaacgtc
atcgatgctgtgcgctgggtgatgggcgagtccagcgccaagaacctgcgcggcgagtcg
atgacggacgtcatcttcaatggctccaccgggcgcaagccggtggggcaggcctccatc
gagctgaccttcgacaatgccgacggcagcctcgggggcgcctggtccgagtacgccgag
atagcggtcaagcgtctggtgacgcgcgatggccagtccggctacttcctcaatggccag
aaatgtcgccggcgtgatatcgccgacgtcttcctcggcaccggcctcgggccgcgctcc
tactccatcatcggtcagggcatgatctcgcagctgatcgaggcgcgcccggatgacctg
cgcagcaccctcgaggaagccgcgggcatctccaagtacaaggagcgccgccgcgagacc
gagaatcgcatgaagcgcacccaggaaaacatggagcgcctggatgacctgcgtgaggag
ctcgacaagcagctcgagcgcctcaagcgtcaggccgaggccgccaagcgctatcagacc
ctcaagcaggacgaatatcgcctcaagggcgagctggccgtgctgcgtcggcggggcctg
cgtgcgcagcagcgcgagcagcagtcacgcgtcgcggagctggaaaccggcgtcgagcgc
gagattctcggtcagcgtcagtgcgagagccagctggaagagcagcgctatcagcacgac
gagctggccggtgagctggaaacccatcaggccgccttctatgagaccggcgcccagatc
gcgcgtatcgagcagagcctcgagcacgctcgcacccgtgagcagcagctggcggcggac
ctcgagatggccaggcgtgagctgagcgacatccagcgcgtcgagggtgaggacggcgag
cgcctcgagatgatcgatgcgcgcctggaagacatcgccccggaactcgagctggcccgc
gagaccctcgatgggctcgagctgtcattggatgaggccgaagagcgccgccaggacagc
cagagcgagtgggagcgcttcagtcaggccgacaacgaatcccagcgtggcgccgagcgg
gcccagagcgagatccagcagctcgagaatgccatcgccgacgccgagcgccagcgcgag
cgccgtcgccagcagctggcggagctgccggatgtcgccgagttgcgtgaagcccgcgag
gagctgcgcgagcagcttgatgaattgtcgctcagcggcgaatcactggagtcgcgccgc
gagcaggccagtgaagcccgtgagcaggcccaggccgatcgtctggcgctggatggagag
cgcgatcagctgcgccagcgtcgcaacgtcttacagggtgagaaagcctcgcttgaggca
ctgatcgacgcggcgctgcgtgacgacgatgacagcctggcgagccatctggagcagcat
gggctcgccgagaccccggcgctggccgaggggctcgaggtcgccgagggctgggaatcg
gccagcgcctgggtgctggggcccttcctcaaggcgcgtctggcggcgagcgagccgtcg
cggctggctacgctgatggacgagctgcccggcggcgagctgttgctggtcgatggcacg
ccggcgtccagcgcggcagcccgccccgctggcaccctggcggcgcaggtgagcggcgcg
gatgccttggccggttggctggccagcatccactgtgtcgagtcgcaggcagccgcctgg
gccaggcgtgattcgctggccgcgcacgagagcgtgctgaccccggatggcctgtggctg
gggcagggctggagccgccgtcaggtggccggtgaacgtgccgatagtgtcatcgcccag
cgggcgcgcctcgagcaggtcgtgctggagctcgagtcactggacgagcgtctcgaggag
atcgagacgcgtctggccgcagccgccgaacagattgccggcgccgagcagcagctcgag
catctgcgcgtcgaagagcgggagcttggcgagcgccagcgtgaactcagtctcaaggag
gccggcatcgccagccgcctggagcatgtcgatggccgcgctcgtgagctggatgaggag
ctcgagcagctggcggaaacgcgcgagactcaggccctgacgctggaggaggcgcgcgag
cgctggcagcaggcattggaggcggtcgagaacaatgcccagtcgcgcgagtcgctggag
cgttcacggcgcgaacatcaggaggcgctggccgggctgcgtgcccagctggcgcccgcg
cgtgagcaggtcaatcgtctcgacatggagtgtcagcgcctgaccaccgagcgtgacggc
atgcagggccagcgcatgcgagccgtcgagcagcgcgagaagctcaccgagcgcatcgag
atgctcgaggccagccgcgaagaagcctcactgccgcaggaagaagagcgcgaaaagctc
gagatgctgctcgagacgcgtctgtatcaggaaaccaagctcaacgcctgtcgtgacaag
actcatgaattggtcgaacagatgcgtcaggcggaacagtcgcgtcagactcatgagcgc
aatctcgaggggattcgccagcgcctcgaggaaggccgcatgcaggtgcaggcgctgacc
ctcaagggcgatgcgcaggacgagcaactggtggaactgggctatgacgaggcggcgatc
acgcagctcgaggacgagctggaccccaatgccaccgaatcggcctggagtcacaacctc
gagcagatcggtgagcgcatcaagcggctgggggccatcaacctggcggccatcgaggaa
tacgaccagcaggccgagcgtcgcaactatctggaagcccagcatgccgagctgagcgaa
gcgctggagaccctcgagcgcgccatccgcaagattgaccaggaaacacgggtgcgcttc
aaggacaccttcgacaaggtcaatgctggaatccaggcgcttttccccaagatcttcggt
ggcggggccgcgtggttgacgctgacaggtgatgatttgctggagacgggggtcgcgatc
atggcgcggccaccgggcaagaaaaactccaccattcacctgctgtcaggcggcgagaag
gcactgacggcactggcgctggtcttcgccatcttccagctcaatccggccccgttctgc
atgctcgatgaggtggatgcaccgctggatgatgccaacgtcggacgctatgcgaggctg
gtgaaggagatgtcggaaagcgtacagttcatctatatcacccataacaagatcgccatg
gaagcggcagatcggctgatgggtgtcaccatgcaggaacccggcgtctcgcgccttgtc
tctgtagggatagaagaagctgccgtgcttgccgaagcgtga
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