Cobetia amphilecti: LCW13_02470
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Entry
LCW13_02470 CDS
T07922
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
camh
Cobetia amphilecti
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
camh03400
]
LCW13_02470
DNA repair and recombination proteins [BR:
camh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LCW13_02470
Archaeal homologous recombinant proteins
LCW13_02470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
nSTAND_NTPase5
nSTAND3
RsgA_GTPase
AAA_22
cobW
Motif
Other DBs
NCBI-ProteinID:
UBU49158
LinkDB
All DBs
Position
complement(560535..564125)
Genome browser
AA seq
1196 aa
AA seq
DB search
MKILALRLDNLASLAGAHEVDFEKAPLSDAGLFAITGPTGAGKSTLLDALCLALYGTTPR
LRQTPSGGQLEDVGEHQLTLKDPRSLLRRGCGEGKAEVDFIGRDGLRYRASWTVSRARGK
PGGRLQNAKQHLQLLPTGDDTQPAQTLNTTSNDAKALIIDRLGLNFEQFTRAVLLAQSEF
SAFLRANDNERSELLEKLTDTGHYSEISMAAHERERAARETVNELERKLEGQLPASPQER
QALEEEVRLRQTAMTRLSEQHDALTAYHQWTTTAGELEQALRQAQQEQTEAHVASDGLSR
QREQLSALEALAPIRPALLRLKAIAPQHAQLVTQLAQLEQQLGALSPRVEQARAARHTAD
ERMQRCDTWRGEQLPKLEEARQVASRLAQQREAHASQQSEQQRLRDTLGQHQQELETQDR
QRQQLEQQLQQLQARLVDESGQPLRDAEDYRDQLQRQRDALLELKPVLSEQISGLARRDE
VQQRLVELEQQLPRQQQALRDVTARQVQALQARDQARHEEDAERRQQEQERLARSDNVMA
LRRGLVQGEECPVCGSHEHPAADQAAPAEALIAQLEQQARERLDQRRQATATAQQAMETA
SHEHARLEEQLGYLQQEQTQLHTELQRLQQQAQSCQTNLSELLARHSLSEQPQLAPLPQL
PAAHALQLIEQRLGELDARQNTLVTTLRQLTPLREQRQALATRHATLTTQCQHGEAQLQQ
CETQITALAREIEQLSATLAQQLSADPKRQHASVSDWSDWIESLTTRMRNEQEDARQALQ
ELSDQQQQLTQQQANLQQRQTELREEQDSLDRERAHWQTANPGLDDARIAELLAVEDHEL
QALRQQLRSAHERVARADALCEERNARQLKHWQAARTSSWQTVLEQLAALEQLAAPAVET
SGAGTAGEGPARESTAREGSAGEGTAGTQETGVIRAQAQQALALHARLQAHAQPPQEDAA
GAPEDAQPQPEEDTHALGEALATLIAALKTPLTAVREAHQSAQAAILNDDQRRSGSAELG
EQLARTRAVHERWGTLSELIGSASGAKFRTIAQAFNLERLIEHANLHLANLVRRYRLARG
ASPLGLVVVDTEMGDELRSVHSLSGGETFLVSLALALGLAGMASGELRIESLFIDEGFGS
LDPDSLALAMEALDGLQASGRRVGVISHVAEMHERIPVRIAVRPSGNGQSRLEIEG
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgccctgcgcctcgacaacctggcgtcgctggccggcgcacatgaagtc
gacttcgagaaggcgccgctgtccgatgccggcctgttcgccatcaccggtcccaccggg
gccggcaagagcacgctgctcgatgccctgtgtctggcgctctatggcaccacgccgcgc
ctgcgccagacgccgagtggcggtcagctggaggatgtcggcgagcatcagctgacgctc
aaggacccgcgcagcctgctccggcgtggctgcggcgaaggcaaggccgaggtggatttc
atcggccgcgatggcctgcgctatcgcgccagctggacggtcagccgcgcacgcggcaag
cccggcgggcgcctgcagaatgccaagcaacatctccagctgctgcccaccggcgatgac
acccagccggctcagaccctcaacaccaccagcaatgacgccaaggcgttgatcatcgac
aggctggggctcaatttcgagcagttcacccgcgccgtactgctggcgcagagcgagttc
agcgccttcctgcgtgccaatgacaatgaacgctcggagttgctggagaagctgaccgat
accggccattactccgagatctcgatggccgcccatgagcgcgagcgcgccgcccgcgag
accgtcaatgaactggagcgcaagctggagggccagctgccggccagcccacaggaacgc
caggcgctcgaggaggaggtgcgtctgcgccagacggccatgacccggctcagtgaacag
catgatgcactgacggcctatcaccagtggaccaccacggcgggcgagctcgaacaggcc
ctgcgtcaggcgcagcaggagcagaccgaggcccacgtcgccagcgatgggctttcccgt
cagcgcgagcaactcagcgccctggaagccctcgcgccgattcgccctgccctgctgcgc
ctcaaggcgatcgcgccgcagcatgcacagctggtcacgcaactggcccagctggagcag
caactcggcgccctgtcgcccagggttgagcaggcccgggccgccaggcacaccgccgat
gaacgcatgcagcgctgcgatacctggcgtggcgagcaactgccgaaacttgaagaggca
cgtcaggtggcctcgcgtctggcgcaacaacgcgaagcacacgccagccagcagagtgaa
cagcaacgcctgcgcgacacgctcggccaacatcagcaggagctggagactcaggatcgc
cagcgccagcagctggagcagcaactccagcagctgcaggcaaggctggtcgacgagtcc
ggccagccgctgcgcgatgccgaagactatcgtgaccagctgcaacgtcagcgcgatgca
ctactggagctcaagcccgtactcagcgagcagatcagtggcctggcccgccgtgatgag
gtgcagcagcgtcttgtcgaactggagcagcaactgccccgacagcaacaggcgttgcgg
gatgtgactgcccggcaggtgcaggcattgcaggcccgtgatcaggcgcgtcacgaggaa
gacgccgagcgccgccagcaggagcaggagcgtctggcgcgcagcgacaacgtgatggcg
ctgcgccgcgggctggtccagggcgaggagtgtccggtgtgcggcagccacgagcacccc
gccgccgaccaggccgcaccggccgaggcgctgatcgctcagctggagcagcaggcccgc
gagcgccttgaccagcgccgccaggccacggccaccgcgcagcaagccatggagacggcc
agtcacgagcacgcccgcctcgaggagcagctcggctatctgcaacaggaacagacccag
ctgcacacggagctgcaacgcctgcagcagcaggcgcagagctgccagacgaacctgagc
gagcttctggcccggcactcgctgtcggagcagccccagcttgcccccttgccgcagctg
ccggctgcccacgcactgcaactgatcgagcagcgccttggggagctggacgcccgccag
aacacgctggtgacgacactgcgtcagctgacgccgctgcgtgagcaacgccaggcactg
gcaacacgccacgccacgctgacgacgcaatgccagcatggcgaggcgcagcttcaacag
tgcgagacgcagatcactgcgctggcgcgcgagatcgagcaactcagcgccacgcttgcc
cagcagctgagcgcagaccccaagcgacagcatgccagcgtgagcgactggtccgactgg
atcgagtcgctgaccacccggatgcgcaacgaacaagaggatgcgcggcaggcgctgcag
gagttgagcgaccagcaacagcagctgacgcagcagcaggccaacctgcagcaacgccag
acggagctgcgcgaggagcaagactcgctcgaccgcgaacgcgcgcattggcagacagcg
aatcccggcctggatgacgcgcgcatcgcggaattgctggccgtcgaggatcacgagctg
caggcactgcgccagcaactgcgcagtgcccacgagcgcgtggcacgcgcggatgcccta
tgtgaggagcgcaatgcgcgccagctcaaacactggcaggccgctcggacctccagctgg
cagacggtactcgagcagctggcagcactcgaacagctggcagcgcccgccgtggagacg
tcaggagcaggtaccgctggagaaggtccggcgagagaaagcacggcgagagaaggcagc
gcaggagaaggcacggcgggaacgcaagagacgggcgtcatccgcgcccaggcccagcag
gccctggcgctgcatgctcgcttgcaggctcatgcgcaacccccgcaagaagatgccgct
ggtgcgccggaggatgcgcagccacagcccgaggaagacacccacgcgcttggcgaggcg
ttggccactttgatcgcggcgctcaagacaccgctcactgccgtgcgcgaggcccatcaa
tcggcgcaggcggcgatactcaatgatgatcagcgccgcagcggcagcgccgaacttggc
gagcagctggcccgcacccgcgcagtccatgaacgctggggcacgctatcggaactgatc
ggcagtgccagtggtgccaagttccgcaccatcgcccaggccttcaacctcgagcgtctg
atcgagcatgccaatctgcatctggccaatctggttcgtcgctatcgtctggcgcgcggc
gccagcccgctgggactggtggtggtggataccgagatgggtgacgagctgcgcagcgtg
cattcgctgtccggcggcgagaccttcctggtctcactggcgctggcgctgggcctggcg
ggcatggcctccggtgagctgcgcatcgaatcgctgttcatcgatgaaggcttcggtagc
ctcgacccggattcgctggccctggcgatggaggcattggatggcctgcaggccagtggc
cgtcgcgtcggggtcatctcgcatgtggccgagatgcatgaacgcattccggtgcggatc
gcggtgcgcccctcgggcaacggccagagccgactggagatcgagggctag
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