Cobetia amphilecti: LCW13_02475
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Entry
LCW13_02475 CDS
T07922
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
camh
Cobetia amphilecti
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
camh03400
]
LCW13_02475
DNA repair and recombination proteins [BR:
camh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LCW13_02475
Archaeal homologous recombinant proteins
LCW13_02475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
UBU49159
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All DBs
Position
complement(564122..565540)
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AA seq
472 aa
AA seq
DB search
MSFRFLHTSDWHLGQSFHGQSRHVEHAAFLDWLLGQLKTLAPDALLIAGDLFDVVNPSLA
AQELLYDFIVRAHEQDAALEIVMIAGNHDSGSRIELPAALLARLKTHALGRVRWVDDSAD
GGDAHSLDCQHLLVPLHDRDGKRRALCLAVPFLRPAEVTGLSSGEQAEQEGEAAGKAERT
RSEAYRDGVARVHQQLVSAARAARQPGEALIAMGHAHMRDGEVSENSERPILMGGEEALS
TSLFPDDIAYVALGHLHRPQRVGGEERIRYCGTPLAMDFSEVDYGHRILDVTLSNESLEK
VEEHRVPCHVALTRVGPAPLAEITTQLTALVAEAQANLEPTRWPWLEVTVQLEAPLIDLR
ARIEALLEGAPLRLIKLVTRYPAPSAELRAPKGVKLDELGPMGLFERHYRATYDNEPDPT
LIEDFAQLLEEVEAACETRLEGEPATRPARKADKAASIDKTGTADKAKGGQA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttccgctttctgcacacttccgactggcatctcggccagagctttcacggccag
agccgtcacgtcgagcatgctgcctttctcgactggctgctcgggcagctcaagactctg
gcgccggatgcgctgctgatcgccggagacctgttcgatgtggtcaacccgagcctggcc
gcccaagagctgctctacgacttcatcgtgcgcgcccacgagcaggacgcggcgctggag
atcgtgatgatcgccggcaatcacgattccggctcgcgcatcgagctgccggccgcgctg
ctggcacgtctcaagacccatgcgctgggacgcgtgcgctgggtggatgactccgccgac
ggcggcgatgcccacagtctcgactgccagcatctgctggtgcccctgcatgatcgtgat
ggcaagcgccgcgccctgtgtctggcggtgcccttcctgcgcccggccgaggtcaccggc
ctgagcagcggcgagcaagccgagcaggaaggagaagcagcaggcaaggccgaacgcacc
cgcagcgaggcctaccgcgacggcgtggcccgcgtgcaccagcagctggtcagtgctgcg
cgcgccgcccgccagcccggcgaggcgctgatcgccatgggccatgcccacatgcgtgac
ggcgaggtgtccgagaacagcgagcgcccgatcctgatgggtggcgaagaggcgctctcg
accagcctgttccccgacgacatcgcctatgtggcgctgggccacctgcatcgcccgcaa
cgcgtgggcggcgaggagcgcatccgctattgcggcacgccgctggcgatggacttctcc
gaggtcgactacggtcaccgcatcctcgatgtcacgctcagcaatgaaagcctggagaag
gtcgaggagcatcgcgtgccctgccatgtcgcgctcacgcgcgtcgggcctgcgccactg
gccgagatcaccactcaactcacggcgctggtcgccgaggcgcaggcgaatctcgagccg
acacgctggccgtggctggaagtgaccgtgcagctggaagccccgctgatcgacctgcgc
gcccgtatcgaggcactgctggaaggcgcgccgctacgtctgatcaagctggtcacccgc
tacccggcgcccagcgccgagcttcgcgcgccgaagggcgtgaagctcgatgagctgggg
ccgatggggctgttcgagcgtcactatcgcgccacctatgacaatgagccggacccgacg
ctgatcgaggatttcgcccagctgctcgaggaagtcgaggccgcgtgcgagacgcgcctc
gaaggcgagccggccacccggcccgctcgcaaggccgacaaggcggcttcgatagacaag
actggcacggcagacaaggccaagggaggtcaggcatga
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