Cobetia amphilecti: LCW13_02640
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Entry
LCW13_02640 CDS
T07922
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
camh
Cobetia amphilecti
Pathway
camh00020
Citrate cycle (TCA cycle)
camh00190
Oxidative phosphorylation
camh00650
Butanoate metabolism
camh00720
Other carbon fixation pathways
camh01100
Metabolic pathways
camh01110
Biosynthesis of secondary metabolites
camh01120
Microbial metabolism in diverse environments
camh01200
Carbon metabolism
Module
camh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
camh_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
camh_M00149
Succinate dehydrogenase, prokaryotes
camh_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LCW13_02640 (sdhA)
00650 Butanoate metabolism
LCW13_02640 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LCW13_02640 (sdhA)
00720 Other carbon fixation pathways
LCW13_02640 (sdhA)
Enzymes [BR:
camh01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LCW13_02640 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
FAD_binding_3
DAO
Pyr_redox_2
GIDA
Pyr_redox_3
Thi4
SPESP1
Motif
Other DBs
NCBI-ProteinID:
UBU49189
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All DBs
Position
610157..611929
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AA seq
590 aa
AA seq
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MSTMRSLTFDAIIIGGGGAGLRAGLELSQSGKKTAVLSKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGGDYIADQDAAEYMCTEGPKAVFELEHMGLPFSRFDNGRIYQRP
FGGQSKDFGKGGQAARTCAAADRTGHALLHTLYQANLKNGTVFLDEWYAIDLVKNANGDI
VGVIALCIETGETVVVKSKATVLATGGAGRIYASTTNALINTGDGIGMALRAGLPVQDME
MWQFHPTGIHGAGVLVTEGCRGEGGYLVNKDGERFMERYAPNAKDLAGRDVVARSMVLEI
LEGRGCGENGDHVFLKLDHLGEEVLNKRLPGISELSKTFAHVDPTNAPIPVVPTCHYMMG
GIATNVHGQAIAQNEDGSDRIVNGLYAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGKY
IESALNEGVEYLEPTQSDIDAALVRLNRWNESESGESVPELKRELQQIMQNSFGVFRQED
KMEEGVKQLSDLRERIAKAGLSDKSQVFNTARIEALELDNLMEVAEATAIAALTRKESRG
AHSRYDFPDRDDENWLKHSLFFPNEKRVGKRDVNFAPKTVERFEPKIRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccatgcgtagcctgacattcgacgcgatcatcatcggcggcggcggcgctggc
ctgcgtgccggtctcgaactgtcccagtccggcaagaagaccgccgtgctgtccaaggtc
ttcccgacccgctcgcatactgtctctgcccagggcggtatcacctgtgccatcgcttct
gctgatccgaatgatgattggcgctggcacatgtatgacaccgtcaagggtggcgattac
atcgctgatcaggacgctgcggaatatatgtgtaccgaaggcccgaaagcggtcttcgag
cttgagcacatgggtctgccgttctcccgtttcgacaacggccgcatctaccagcgtccg
ttcggtggccagtccaaggacttcggcaagggcggccaggcggctcgtacctgcgccgcg
gctgaccgtaccggtcacgccctgctgcacactctgtatcaggccaacctgaagaacggc
accgtcttcctcgacgagtggtacgccatcgatctggtcaagaatgccaacggcgatatc
gtcggcgtgattgccctgtgcatcgagaccggcgagaccgtggtcgtgaagtccaaggcc
accgttctggccactggcggtgcgggccgtatctacgcctccaccaccaatgccctgatc
aacaccggcgacggtatcggcatggcactgcgtgccggcctgccggtccaggacatggaa
atgtggcagttccacccgaccgggatccacggtgcgggcgtgctggtcaccgaaggttgc
cgcggtgaaggtggctacctggtcaacaaggacggcgagcgcttcatggagcgttatgcg
ccgaacgccaaggacctcgcgggccgtgacgtcgtcgcgcgctccatggtgctggaaatc
ctcgaaggccgtggctgtggcgagaatggcgaccacgtcttcctgaagctggatcacctg
ggcgaggaagtgctgaacaagcgcctgccgggtatctccgagctgtccaagaccttcgcg
cacgtcgatccgaccaacgcgccgatcccggtcgtgccgacctgccactacatgatgggt
ggcatcgccaccaacgtgcacggtcaggccatcgcacagaacgaagacggcagcgaccgc
atcgtcaacggcctctatgccgtgggtgaagtggcctgtgtgtcggttcacggtgccaac
cgtctgggcggcaactcgctgctggatctggtcgtcttcggccgcgccgcgggcaagtac
atcgaaagcgcgctcaacgaaggtgtcgagtacctcgagccgacgcagagcgacatcgat
gcagccctggtgcgcctgaaccgctggaacgagtccgaaagcggcgagtccgtgccggaa
ctcaagcgcgaactgcagcagatcatgcagaactccttcggtgtcttccgtcaggaagac
aagatggaagagggcgtcaagcagctgtccgatctgcgtgagcgtatcgccaaggcgggt
ctgtccgacaagtctcaggtcttcaataccgcgcgtatcgaagctctcgagctggacaac
ctgatggaagtggcggaagccactgccattgcggccctgacccgcaaggaaagccgtggt
gctcactcccgttacgacttcccggaccgtgatgacgagaactggctcaagcattctctg
ttcttcccgaacgagaagcgtgtcggcaagcgtgatgtgaacttcgcgccgaagaccgtc
gagcgtttcgagccgaagattcgtacctactga
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