Cobetia amphilecti: LCW13_03140
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Entry
LCW13_03140 CDS
T07922
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
camh
Cobetia amphilecti
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
camh03016
]
LCW13_03140 (miaB)
Enzymes [BR:
camh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
LCW13_03140 (miaB)
Transfer RNA biogenesis [BR:
camh03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
LCW13_03140 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
UBU49277
LinkDB
All DBs
Position
complement(744298..745647)
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AA seq
449 aa
AA seq
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MAKKLFIKTHGCQMNEYDSARMADLLGESHQMEVTSDESEADVILLNTCSIREKAQEKVF
HQLGRWKKLKEKNPELVIGVGGCVASQEGDNLRKRAPHVDMVFGPQTLHRVPKMLDTRRD
SLKQISVVDVTFPEIEKFDNLPAPKSDGASAFVSVMEGCSKYCTFCVVPYTRGEEVSRPF
EKVMDEVIHLADQGVREINLLGQNVNAYAGLNQLGEEIDLAELISCVAQVEGIDRIRFTT
SHPLEFKDSLIEAFGEIPELVSHLHLPVQSGSNRILAAMKRGHERDLYIDKLERIRALRP
DISFSSDFIVGFPGETDQDFMDTMDLIGQIGFDHSFSFIYSARPGTPAANLEDDTPEEVK
KERLLILQERINQQAMQIGRKMVGTTQRILVSGFSPRDPGLLSGRTENNRVVNFRAANPT
ELIGYLVDVEITEAYPNSLRGELSSPYRY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaactcttcatcaagactcacggctgccagatgaacgagtatgactccgcg
cgcatggcggatctgctcggcgaatcgcatcagatggaagtcaccagcgacgaatccgaa
gcagacgtcatcctgctcaacacctgctccatccgcgagaaggcgcaggagaaggtgttc
caccagctgggacgctggaagaagctcaaggaaaagaacccggagctggtgatcggcgtc
ggcggctgcgtggccagccaggaaggcgacaacctgcgcaagcgtgccccgcatgtggac
atggtgttcggcccgcagaccctgcaccgcgtgccgaagatgctcgacacccgccgcgac
agcctcaagcagatttccgtggtcgacgtgaccttccccgagatcgagaagttcgacaac
ctgcccgcgcccaagagcgacggtgccagcgccttcgtctcggtgatggaaggctgctcc
aagtactgcaccttctgtgtggtgccctacacccgcggtgaggaagtctcgcgtcccttc
gagaaggtgatggatgaagtcatccacctggccgaccagggcgtgcgcgagatcaacctg
ctgggccagaacgtcaacgcctacgccggtctcaaccagctgggcgaggagatcgacctc
gccgagctgatcagctgcgtggcgcaggtcgagggcatcgaccgcatccgcttcaccacc
tcgcatccgctggagttcaaggactcgctgatcgaggccttcggtgagatcccggagctg
gtcagccacctgcacctgccggtgcagtcgggctccaaccgcatcctggcggccatgaag
cgcggccacgagcgtgacctctacatcgacaagctcgaacgcatccgcgcgctgcgtccg
gacatcagcttctcctccgacttcatcgtcggcttcccgggcgagaccgatcaggacttc
atggacaccatggacctgatcggccagatcggcttcgatcactccttcagcttcatctac
tccgcgcgtccgggcaccccggcggcgaatctggaagatgacactccggaagaggtgaag
aaggagcgcctgctcatcctgcaggagcgcatcaaccagcaggcgatgcagatcggtcgc
aagatggtcggcaccacccagcgcatcctggtctccggcttctcgccgcgtgacccgggc
ctgctgtccgggcgcaccgagaacaaccgggtggtcaacttccgcgccgccaacccgacc
gagctgatcggctacctggtggatgtcgagatcaccgaggcctaccccaactcgctgcgc
ggtgagctcagctcgccctaccgctattga
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