Cobetia amphilecti: LCW13_05020
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Entry
LCW13_05020 CDS
T07922
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
camh
Cobetia amphilecti
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
camh01011
]
LCW13_05020
Enzymes [BR:
camh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LCW13_05020
Peptidoglycan biosynthesis and degradation proteins [BR:
camh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LCW13_05020
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
TPR_CcmH_CycH
TPR_2
SLT_4
Motif
Other DBs
NCBI-ProteinID:
UBU49624
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All DBs
Position
complement(1171580..1173562)
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AA seq
660 aa
AA seq
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MTPGKQTLRPRGSRRFAALRHLTGLGLLLGLSLPLQAATPSDQSFRAAFDDARAKRFDEI
QQVAVNGHVLEGYIEYHQLKARLPYATAAEVLSFIERHADSPLAEWMRGQAISAYGRTGR
HDALLEVSDGVPAGAQRQCYYYTAQLSNDIASASQGGLKLWHVSGSQDSACDPLFSALRE
RGVIDDQAIWERAMLAWAAGQGGMVSYLERQLPSNWQRAIAAREQLEGNFAAITRLPTNL
GRGGHAFAALSVAAMHGFVRADTEAALEAWRKVNPHMPMSDEQRHTVERDLAWYSLVRDI
PNNRGWVDQRLTILDDEELFDLRMRNAVRDGDWPQVREWVLKMPDRFRNEARYQYWLGRA
DDSLGRPQEARAAWTRAATERNFYGFLAADRIGQAYSLNRDDQDFSDAELAEVAETPAVK
RVRALMNIDEIGLARSEWFNAVTQADDADARRLAAYALQQKWYDLTVFATIRGQLWDGLS
WRFPPAWQHDFQRFGADAGVDPWMLMALARRESAFNPTATSPVGARGLMQLMPGTAAQVS
RGLGLPTPSNAALGDPVTNIRLGSTYIREMLDRYSGNRLAAAAAYNAGPGRVDRWLADTP
GEYDRFVERIPFKETREYVKAVLAYRVIFESLAKGTSEGVKVVSDREVSQRYTTALMDRR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
gtgacaccaggcaagcaaactctccgaccccgtggcagccgtcgcttcgcggcgctgcgg
cacctcaccggcctaggcctgctgttgggactgagcctgcccctgcaggccgccactccc
agtgaccagagcttccgcgccgccttcgatgatgcgcgcgccaagcgctttgacgagatt
cagcaggtcgccgtcaatggccacgtgctggagggctacatcgagtatcaccagctcaag
gcccgcctgccgtacgccaccgccgcggaagtgctgtccttcatcgagcgtcatgcggac
tcgccgttggccgagtggatgcgaggccaggcgatctccgcctacgggcgtaccggccgt
catgatgccctgctggaagtcagcgatggcgtgccggcgggcgcgcagcgccagtgctat
tactacacggcgcagctgagcaatgatatcgcgagcgcatcgcaaggcggcctgaagctc
tggcatgtgtccggctcgcaggactcggcctgtgacccgctgttctcggcgttgcgcgag
cgtggcgtgatcgatgatcaagccatctgggaacgcgccatgctcgcctgggctgccggc
cagggtggcatggtcagctatctcgagcgccagctgcccagcaactggcagcgggccatc
gcggcacgcgaacagcttgaaggcaactttgccgccatcacgcgcctgccgaccaacctc
ggccgcggcggccatgccttcgccgccttgagcgtcgccgccatgcatggcttcgtgcgt
gccgacaccgaggccgcgctggaagcctggcgcaaggtgaatccgcacatgccgatgagt
gatgagcagcgccacaccgtcgaacgcgacctggcctggtattcactggtgcgcgacatc
cccaacaaccgcggctgggtcgatcagcgcctgaccatcctcgatgacgaggagctgttc
gatctgcgcatgcgcaacgcggtacgcgatggcgactggccgcaggtgcgtgaatgggtg
ttgaagatgccggaccgcttccgcaatgaagcccgctaccagtattggctggggcgtgcc
gatgacagcctgggtcgcccgcaggaagcacgcgccgcctggacgcgcgccgcgaccgag
cgcaacttctacggcttcctggccgccgaccgtatcgggcaggcgtattcgctcaatcgc
gatgaccaggacttctccgacgcggaactggccgaggtcgccgagacgccggccgtcaag
cgtgtcagggcgctgatgaacatcgacgagatcggtctggctcgctccgagtggttcaac
gccgtcacccaggcggatgacgccgatgctcgccgtctggcagcctatgcactgcagcag
aaatggtatgacctgaccgtcttcgccaccatccgcggccagctgtgggatggcctttcc
tggcgcttcccgccggcctggcagcatgacttccagcgcttcggtgccgatgccggcgtc
gacccgtggatgctgatggcactcgcgcgtcgcgagagcgccttcaatcccaccgccacc
tcgccggtgggcgcacgcggtctgatgcagctgatgccgggcaccgccgctcaggtcagt
cgcggcctggggctgcccacgcccagcaacgcggcactgggtgatccggtcaccaatatc
cgtcttggcagcacctatatccgcgagatgctggaccgctactcaggcaaccgcctggcc
gccgccgcggcctacaacgccgggccgggacgcgtcgatcgttggctcgccgataccccg
ggcgaatacgaccgcttcgtcgagcgtatccccttcaaggagacccgcgaatacgtcaag
gccgtgctggcctaccgcgtgatcttcgaaagcctggccaagggcaccagcgagggcgtc
aaggtggtcagcgaccgcgaagtcagccagcgctacaccaccgcgctgatggatcgccgc
tga
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