Cobetia amphilecti: LCW13_07870
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Entry
LCW13_07870 CDS
T07922
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K25495
AraC family transcriptional regulator, regulator of nimT
Organism
camh
Cobetia amphilecti
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
camh03000
]
LCW13_07870
Transcription factors [BR:
camh03000
]
Prokaryotic type
Helix-turn-helix
AraC family
LCW13_07870
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_23
AraC_binding
Motif
Other DBs
NCBI-ProteinID:
UBU50148
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Position
complement(1829003..1829881)
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AA seq
292 aa
AA seq
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MSVTTPALPSSPGVSTRGPDQVPFSSSVCEHDPDIYEIPASALHVETGQQVMEVPIHQHR
KGQLVIALHGVVTSRVPEGLWMVPPHSGVWIPGNLPHSNHLTRGGRVCHLFIEPGALEMP
SHSCTLSISPLLRELVLRLAELPQPYPEQGPTARLVGVLLEELACMPSERLHLPLPEDPR
LTRISDALIKTPDDRRTLAEWAGELAMSERTLARLIQRDTGLSFSRWRQQLHLVVAIRLL
AEGMSVQRVSEDVGYQSVNAFISMFKKLLGTTPARYLQEREQRRSGSGMGGA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgaccacacccgccctaccgtcatcgcccggggtcagcacccgtggccccgat
caggtgcccttctccagcagcgtctgcgagcacgacccggacatctacgagattccggcc
agcgcactgcatgtcgagaccggccagcaggtgatggaggtgccgatccaccagcatcgc
aagggacagctggtgatcgccctgcatggcgtggtgaccagtcgcgtaccggaaggtctg
tggatggtgccgccgcacagcggggtctggattcccggcaacctgccccacagcaaccac
ctgacccgtggcggccgcgtctgccacctgttcatcgagcccggtgcgctcgagatgcca
agccacagctgcacgctgtcgatctcgcccctgctgcgtgagctggtgttgcgcctggcg
gagctgccccagccgtatcctgaacaggggccgaccgcgcggctggtcggtgtgctgctg
gaagagctggcctgcatgcccagcgaacgtctgcacctgcccttgcccgaagacccgcgg
ctgacccgcatcagcgatgccctgatcaagaccccggacgaccgacgcaccctggccgag
tgggcaggcgaactggcgatgagcgaacgcaccctcgcccggcttatccagcgtgacacc
ggcctgagcttcagccgctggcgtcagcaactgcacctggtggtggcgattcgcctgctg
gccgaaggcatgagcgtgcagcgcgtctcggaagacgtcggctatcagtccgtcaacgcc
ttcatcagcatgttcaagaagctgctcggcaccacgcccgcccgctacctgcaggaacgc
gagcaacgccgctcgggcagtggcatgggcggcgcgtga
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