Cobetia amphilecti: LCW13_08205
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Entry
LCW13_08205 CDS
T07922
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
camh
Cobetia amphilecti
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
camh01011
]
LCW13_08205
Enzymes [BR:
camh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LCW13_08205
Peptidoglycan biosynthesis and degradation proteins [BR:
camh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LCW13_08205
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
NMB0315_dom_I
LysM2_CERK1_LYK3_4_5
LysM_RLK
LysM_OapA
HTH_28
Motif
Other DBs
NCBI-ProteinID:
UBU50213
LinkDB
All DBs
Position
complement(1913091..1914497)
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AA seq
468 aa
AA seq
DB search
MHQQDLRTDGQMAADTPCRVTPTQAPFRPARLRHLIRLASLGATLCLMPLTASANSAMVS
GVSPTSEYQRAPLNFMEAVDAIPAHYDDVWERLRAGYQLQQDTGRPRVRKWISWYQEHPH
HVERIAEQARPWIRYVTLRTEARGLPAELALLPFIESAYDPDAAHPGGATGMWQFMPRTG
DAMGLTRNRWYDGRKDVLLSTDAALDYLETQGERWYDGDWELALAAYNAGAGTVNRARRR
AGGDEDYWNIKLPNETMEYVPKLLALAAVIRDPEEYGLSLPKIDDRPEIAAVETGGQLDL
STAAKLAGISEDELRALNPAYKRWATTPGDSSLVIPATARDTFLSQLATLPEKARQSWAS
YRVKRGDTLSVIARRNGLTLSELKQKNRLSGNTIRIGQALMVPDRGASVATQLASANGEK
KVRVKSGDSLSLIAARHNVSTRQLARWNKLSSADYLRPGQMLTLYSAN
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagcaagacctccgtaccgacggccagatggccgccgacacgccgtgtcgtgtc
actccgacccaggcccccttccgtccggctcgactgcgtcacctgattcgcctcgcctct
ctgggtgccaccctgtgcctgatgccgctgaccgccagcgccaattcagcgatggtgtcc
ggggtctcgcccaccagtgaatatcagcgcgccccgctgaacttcatggaggccgtcgac
gccattcccgcgcactacgacgacgtctgggagcgcctgcgcgccggctatcagctgcag
caggacaccggtcgtccacgcgtgcgcaaatggatcagctggtatcaggagcacccccac
cacgtggagcgtatcgcggaacaggcccgcccctggattcgctacgtgacactgcgcacc
gaagcacgcggcctgccggcagagctggcactgctgcccttcatcgagagcgcctacgat
ccggatgccgcgcatccgggcggtgcgaccggcatgtggcagttcatgccgcgcaccggt
gacgccatggggctgacacgcaaccgctggtatgacggtcgcaaggacgtgttgctgtcc
acggatgccgcgctggattacctggagacccagggcgagcgctggtatgacggcgactgg
gagctggcgctggccgcctacaatgccggtgccggcaccgtgaatcgtgcacgccgccgc
gccggtggcgatgaggattactggaacatcaagctgcccaacgagaccatggaatacgtg
ccgaagcttctggcactggccgcggtgattcgcgaccctgaggaatatgggctctcgctg
ccgaagattgacgacaggccggaaatcgcggccgtcgagacgggcgggcaactagacctg
tccaccgccgccaagctggccggcatcagtgaagacgagctgcgcgccctgaacccggcc
tacaagcgctgggccaccacgcccggtgacagctcgctggtgattcccgccaccgcccgc
gataccttcctcagccagctggccacgctgcctgaaaaagcgcgccagagctgggccagc
tatcgcgtcaagcgcggcgacaccctgtccgtcatcgcgcgccgcaatggcctgacgctc
tccgagctgaagcagaagaaccgcctctcgggcaacaccatccgcatcggccaggcactg
atggtgccggaccgcggcgcctcggtggccacccagctggcctcggccaacggcgagaag
aaggtgcgcgtgaagagtggcgattccctgtcattgatcgccgcacgccacaatgtcagc
acacgccagctcgcgcgctggaacaagctgtcatctgcggactacctgcgccccggtcag
atgctgaccctttacagcgccaactga
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