Cobetia amphilecti: LCW13_08225
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Entry
LCW13_08225 CDS
T07922
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
camh
Cobetia amphilecti
Pathway
camh03030
DNA replication
camh03430
Mismatch repair
camh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCW13_08225 (dnaQ)
03430 Mismatch repair
LCW13_08225 (dnaQ)
03440 Homologous recombination
LCW13_08225 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
camh03032
]
LCW13_08225 (dnaQ)
03400 DNA repair and recombination proteins [BR:
camh03400
]
LCW13_08225 (dnaQ)
Enzymes [BR:
camh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCW13_08225 (dnaQ)
DNA replication proteins [BR:
camh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LCW13_08225 (dnaQ)
DNA repair and recombination proteins [BR:
camh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LCW13_08225 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UBU50216
LinkDB
All DBs
Position
1918047..1918838
Genome browser
AA seq
263 aa
AA seq
DB search
MRQIILDTETTGIDPKEGHRLIEIGAVEMINRRLTGRTYHQYVNPERLIDAEAIGVHGIT
DERVANEPVFAEIADAFWDFIKGAQLVIHNAPFDVGFIDHEFGLINPGRANPLGPVADHC
AILDTLKLAREKHPGQRNNLDALCKRYDIDNGHRVLHGALLDAEILGDVYLAMTGGQTAL
GLDVIEEGDGEEGGIVGVRRLRADRPRLVTPGLSALELERHSAWCEEIRGKADECLFDRL
SIDALGSLDSASLDSRGNRGDDA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagattattctcgatactgaaacgacaggtatcgatccgaaggaaggccatcgc
ctgatcgagatcggcgcggtggagatgatcaaccgccgcctgaccggacgcacctaccat
cagtacgtcaatcctgagcgcttgatcgatgcagaggcgatcggggtccacggcatcacc
gatgagcgagtcgccaacgagccggtcttcgccgagatcgccgatgccttctgggacttc
atcaagggtgcccaactggtcatccacaatgcgcccttcgatgtgggcttcatcgatcac
gaattcgggctgataaatcccgggcgtgccaacccgttgggcccggtcgccgatcactgc
gccattctcgataccctgaagctggcccgagaaaagcaccccggacagcgcaacaacctg
gatgcgctgtgcaagcgctacgatatcgacaacgggcatcgcgtgctgcacggcgccttg
ctggatgccgagattctcggcgacgtctatctggcgatgaccggtggccagacggcgctg
ggcctggacgtgatagaggaaggcgatggcgaggagggcggtatcgtcggggttcgtcgc
ctgcgtgccgatcgcccacgcctggtcacgcccgggctttccgcgctggaacttgagcgt
cactcggcttggtgtgaagagattcgcggcaaggcggatgagtgcctgttcgatcgcctc
tcgatcgatgcactgggcagtcttgatagtgccagtctggacagccgaggcaaccgcgga
gacgacgcctga
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