Cobetia amphilecti: LCW13_08705
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Entry
LCW13_08705 CDS
T07922
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
camh
Cobetia amphilecti
Pathway
camh00061
Fatty acid biosynthesis
camh00071
Fatty acid degradation
camh01100
Metabolic pathways
camh01212
Fatty acid metabolism
camh02024
Quorum sensing
camh04146
Peroxisome
Module
camh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LCW13_08705
00071 Fatty acid degradation
LCW13_08705
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LCW13_08705
09145 Cellular community - prokaryotes
02024 Quorum sensing
LCW13_08705
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
camh01004
]
LCW13_08705
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
camh04147
]
LCW13_08705
Enzymes [BR:
camh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LCW13_08705
Lipid biosynthesis proteins [BR:
camh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LCW13_08705
Exosome [BR:
camh04147
]
Exosomal proteins
Exosomal proteins of breast milk
LCW13_08705
Exosomal proteins of breast cancer cells
LCW13_08705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
UBU50428
LinkDB
All DBs
Position
2034351..2036015
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AA seq
554 aa
AA seq
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MSGMSCLRSSQEVDFSGYDSLMDMLEKACSAHGERPAFTCMDRTMTFAELDATSRQLADW
FQHETDLKLGDRVAIQLPNTLMFPVVAFAVLRAGLVLVNTNPLYTEREMEHQFNDSGARA
LVVLANMADKVERVRERTGLEYVLVCELGDMHPAFKRLLINTVVKHVKKLVPSYHLPDAI
SLRTAISQGKSERWERPTLALDDVAVLQYTGGTTGVAKGAMLTHRNLLANMLQGKMALTQ
GLNPGHETLVAPLPLYHIYAFTIHLACMLSEGNHTLLIPNPRDIPGFVKTLQKHDFTMFV
GLNTLFVALCNNPGFQALDFSKLKITTSGGVALTRKAAEEWKRVTGSDISEGYGMTETSP
IVSFNPLDAIQLGTIGRPMPSTEVRLYDDEGALVAMGEPGELCVKGPQVMKGYWQREQAT
KDSFTADGFLRTGDIAVFQDDGYMRIVDRKKDMIIVSGFNVYPNEVEDVIVRHPDVLEAA
AVSVVDERSGEAIKLYVVLKDGAELEADALRDWSRKELASYKVPRQVVFIDELPKTNVGK
VLRRELRDSPPESA
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcatgtcgtgcctgcggtcttctcaggaggtggatttcagcggctacgactcc
ctgatggacatgctggagaaggcctgctcggcgcatggcgagcgtcctgcctttacctgc
atggaccgcaccatgacgtttgcggagctggatgccaccagtcgtcagctggcggattgg
ttccagcatgaaactgacctcaagctgggcgatcgggtcgccatccagctgcccaatacg
ctgatgtttccggtggtggccttcgccgtgctgcgtgcaggcctggtgctggtgaatacc
aatccgttgtataccgaacgtgagatggagcatcagttcaatgactccggcgcgcgggcg
ttggtggtgctggccaacatggcggacaaggtcgaacgcgtgcgggagcgcactggtctc
gagtacgtgctggtctgtgagctgggcgacatgcacccggccttcaagcggctgttgatc
aacaccgtggtcaagcacgtcaagaaactggtgccgagctatcatctgcccgacgccatt
tcgctgcgcacggccatctcgcagggcaagtccgagcgctgggaacggccgacactggca
ctcgatgatgtcgctgtgctgcagtacaccggcggcaccaccggggtcgccaagggcgcg
atgctgactcaccgcaacctgctcgccaacatgctgcaaggcaagatggccctcacgcag
ggcttgaatcccggccatgagacgctggtggcgccgctgccgctctatcacatctacgcc
ttcaccattcatctggcctgcatgctcagtgaaggcaatcacaccctgctgattcccaat
ccgcgcgatatcccgggcttcgtcaagacgctgcaaaagcacgacttcacgatgttcgtc
ggtctcaatacgctgttcgtggcgctgtgcaacaaccccggcttccaggcactggacttc
tcgaagctcaagatcaccacctcagggggcgtggcgctgacgcgcaaggcggcagaagag
tggaagcgggtcaccggcagcgatatctccgagggctacggcatgaccgagacctcgccg
atcgtgtcgttcaacccgctggatgccattcagctcggcaccatcggtcggccgatgccc
tccaccgaggtgcgcctatatgacgatgaaggcgcgctggtcgcgatgggggagccgggc
gagctgtgcgtgaaggggccgcaggtgatgaagggctactggcagcgtgagcaggcgacc
aaggacagcttcactgccgatggcttcctgcgcaccggtgatatcgcggtcttccaggac
gatggctatatgcgcatcgtcgatcgcaagaaggacatgatcatcgtttccggcttcaac
gtgtatcccaatgaggtcgaggacgtcatcgtgcgtcacccggacgtgctcgaggcggcc
gccgtctcggtggtggatgagcgcagtggtgaggcgatcaagctgtatgtcgtgctcaag
gatggcgcagagctcgaggcggatgcgctgcgagactggtcgcgcaaggaactggccagc
tacaaggtgccgcgtcaggtggtcttcatcgacgagctgcccaagaccaacgtcggcaag
gtgctcagacgtgagctgcgcgactcgccgccggaatctgcctga
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