Cobetia amphilecti: LCW13_09515
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Entry
LCW13_09515 CDS
T07922
Name
(GenBank) RraA family protein
KO
K10218
4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:
4.1.3.17
]
Organism
camh
Cobetia amphilecti
Pathway
camh00362
Benzoate degradation
camh00660
C5-Branched dibasic acid metabolism
camh01100
Metabolic pathways
camh01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
LCW13_09515
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LCW13_09515
Enzymes [BR:
camh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.17 4-hydroxy-4-methyl-2-oxoglutarate aldolase
LCW13_09515
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Gene cluster
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Motif
Pfam:
RraA-like
zf-SCNM1
Motif
Other DBs
NCBI-ProteinID:
UBU47313
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All DBs
Position
2237131..2237799
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AA seq
222 aa
AA seq
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MYQLNDMPAQVAPERLEQLKQCETATIGHFHTRGFVDPAIASMLPEVRIAGTAITVSLPP
EDGTLLNHLMRLVRPGDVLIVHRQGDRHRACWGGVMTTVASRLGVAGVVIDGMATDALTI
RDKQFPVWSRGVASLTTRFAGIGGALNVPVSIGGVVVNPGDAILADESGVIVMAPEEVSA
IASHAIEVQEAEDVLLAKIADGACLPDLTGSSKLIEEVNARC
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaactcaatgacatgccagcgcaggtcgcgcctgaacggctggaacagctcaag
cagtgcgagacggccaccatcggccacttccacacccggggcttcgtcgatccggcgatt
gccagcatgctgcccgaggtgcgcatcgccggtaccgccatcactgtctcgctgccgccg
gaagatggcaccctgctcaaccatctgatgcgtctggtgcgcccgggcgatgtgctgatc
gtgcatcgacagggcgatcgccaccgcgcctgctggggcggcgtgatgaccacggtcgcc
tcgcgcctcggcgtggccggtgtggtgatcgacggcatggccaccgatgcgctgaccatt
cgcgacaagcagttcccggtctggagtcgcggcgtcgcgtcactgaccacgcgcttcgcc
ggaatcggcggcgcactcaacgtgccggtcagcatcggcggcgtggtcgtcaatccgggc
gatgccatccttgccgatgaaagtggcgtcatcgtcatggcgcccgaggaagtctcggcc
atcgccagccacgccatcgaggtgcaagaagccgaagacgtgctgctggcgaagattgcc
gacggcgcctgcctgccagacctcactggttccagcaaactgatcgaggaagtgaacgca
cggtgttga
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