Cobetia amphilecti: LCW13_10400
Help
Entry
LCW13_10400 CDS
T07922
Name
(GenBank) IS1380 family transposase
Organism
camh
Cobetia amphilecti
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_1_4
DDE_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
UBU47475
LinkDB
All DBs
Position
complement(2441988..2443406)
Genome browser
AA seq
472 aa
AA seq
DB search
MFLPEHDSRGPLAMGETLTTWTPSCNGSVRVELSGHRTTSDSGALLLREALDSSGVIEAL
EDNLVDPRHPLRIRHSLASQIRTLVLQRAMGWIDLSDTDTLRRDPLWQLACSDARGMTPL
VQDRPSQATLSRLLTCLGHNDNIDAVHEGLLRLVAWRLTSLKNGERPKQLTLDIDGLPIE
VHGHQGGSAYHGLYGTRIYSPLVASLAETGDMVGGLLREGNAGPAENADTWIPHLVKRLN
ESTGAQVRVRIDAGFTDNDTLEALEKRSIEYLGRLRSHKGLQALAAPYLKRPRGRPPEQP
REWCHDLEYQAGTWPTPRRVVLVVQERPDDLLLHAFFLVTNLGKFDWPPEKILALYRKRG
SAEAHMGEVKSALDVHLSSTDRGASTVQDVMARNEVSLLLSLYAYQVLHGLRCLLGRQTR
QGWSLSRMREQVLKVAATLSLHARRITVHLGDAADKWWPALLKGLPKLTALS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgccagaacacgattcaagaggaccactcgccatgggtgaaaccctaacgacc
tggacgccctcatgcaacggctctgtccgtgtcgagctgagcggccaccgcaccaccagc
gacagcggcgcattgttgctgcgcgaagccctcgacagcagtggcgtgatcgaggcgctc
gaagataacctggtcgatccgcgccatccgctgcgtattcgccactcgctggccagccag
atacgcaccttggtgctgcagcgggcgatggggtggatcgatctcagcgataccgacacg
ctgcgccgtgatccgctctggcagctggcctgcagtgatgcgcgcggcatgacgccactg
gtccaggataggccgtcccaagccacgctgtcgcggctgctgacctgccttggacacaac
gacaacatcgatgccgtgcatgaaggtctgctgcggctggtggcctggcgcctgacctcg
ctgaagaacggcgagcgtcccaagcagctgacgctagacatcgacggcctgccgattgag
gtccatgggcaccagggcggttccgcttatcatggcctttacggtacgcggatctattcg
ccgctggtcgcctcgttggccgaaactggcgacatggtcggcggcctgctgcgcgagggc
aacgccggccccgccgagaacgctgatacgtggatcccgcacctggtgaagcggcttaac
gagagcaccggcgcccaggttcgggtgcgtatcgacgctggcttcaccgacaacgacacg
ctggaggcgctggagaagcgcagcatcgagtacctgggccggctgcgcagccacaagggc
ttgcaggcgctggcagcgccctacctgaagcggccacgcggccggccacctgagcagcct
cgggagtggtgccacgaccttgaataccaggccggtacctggccaacgccacgacgcgtg
gtgctggtggttcaggaacgccccgatgacctgctgctgcatgccttcttcctggtcacc
aacctcggcaagttcgactggccgcccgagaagatcctggcactctatcgcaagcgcggc
agcgccgaagcgcacatgggcgaggtgaagtcggcgctcgacgtgcatctctcgtcgacc
gatcgcggtgcctccaccgtccaggacgtgatggcccgcaatgaggtgagcctgttgctg
agtctctacgcctatcaggttctgcatggccttcgctgcttgctggggcgccagacccgg
cagggttggagcctgagccggatgcgtgaacaggtgctcaaggtggcggcgacgctctcg
ctgcacgctcggcgcatcaccgttcacctcggcgatgcggctgataaatggtggcctgcc
ttgctgaaggggctgccgaagctgaccgcgctcagctga
DBGET
integrated database retrieval system
