Cobetia amphilecti: LCW13_12975
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Entry
LCW13_12975 CDS
T07922
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
camh
Cobetia amphilecti
Pathway
camh00260
Glycine, serine and threonine metabolism
camh00460
Cyanoamino acid metabolism
camh00630
Glyoxylate and dicarboxylate metabolism
camh00670
One carbon pool by folate
camh00680
Methane metabolism
camh01100
Metabolic pathways
camh01110
Biosynthesis of secondary metabolites
camh01120
Microbial metabolism in diverse environments
camh01200
Carbon metabolism
camh01230
Biosynthesis of amino acids
camh01240
Biosynthesis of cofactors
camh04981
Folate transport and metabolism
Module
camh_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LCW13_12975
09102 Energy metabolism
00680 Methane metabolism
LCW13_12975
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LCW13_12975
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LCW13_12975
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LCW13_12975
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LCW13_12975
Enzymes [BR:
camh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LCW13_12975
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DUF3863
Motif
Other DBs
NCBI-ProteinID:
UBU47939
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Position
complement(3085860..3087122)
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AA seq
420 aa
AA seq
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MFTRDMQIAGFDDALLSAMDDEVVRQEAHIELIASENYASPRVIQAQGSQLTNKYAEGYP
GKRYYGGCEFVDKVEQLAIDRACELFGATYANVQPHAGSQANSAVFQALVSPGDTILGMS
LDAGGHLTHGARPNFSGKHYNAVQYGLGENGLIDYAEVARLAREHKPKMIIAGFSAYSQI
IDWAEFRKIADEVGAYLLVDMAHVAGLVAAGVYPSPLPHAHVVTTTTHKTLRGPRGGLIL
SAEGNADIEKKLNSAVFPGGQGGPLMHVIAAKAVCFKEAMDPAFTTYQKQVVKNAKAMAS
VFLERGFEVVSGGTEDHLFLLSLVKQGLTGKDADAALGRAHITVNKNAVPGDPQSPFVTS
GLRIGTPAVTTRGFQEQECLELAGWICDILDAMVAGDSAAAEAEVQAKVSAVCARLPVYA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgttcacccgtgacatgcagattgccggttttgatgatgcgctcctgagcgccatggac
gacgaagtcgttcgccaggaagctcacatcgagctgatcgcctccgagaactacgccagc
ccccgcgtcatccaggcgcaaggctcccagctgaccaacaagtacgcggaaggctacccg
ggcaagcgttactacggcggttgcgagttcgtcgacaaggtcgagcagctggccatcgat
cgtgcctgcgaactgttcggtgccacctacgccaacgttcagccgcacgccggttcccag
gccaacagtgccgtcttccaggcgctggtctcgccgggtgacaccattctgggcatgagc
ctggacgcggggggtcacctgactcacggtgcacgtccgaacttctccggcaagcactac
aacgccgtgcagtacggtctgggcgagaacggcctgatcgactacgccgaagtcgcgcgt
ctggcgcgtgagcacaagccgaagatgatcatcgccggcttctccgcttactcccagatc
atcgactgggccgagttccgcaagatcgccgacgaagtgggtgcctacctgctggtcgat
atggcccacgtggccggtctggtcgccgctggcgtctacccgagcccgctgccccacgcc
cacgtcgtcaccaccaccacgcacaagaccctgcgcggtccgcgtggcggcctgatcctg
tccgccgaaggcaatgccgacatcgagaagaagctgaactccgctgtcttcccgggcggc
cagggtggtccgctgatgcacgtcatcgcggccaaggcggtctgcttcaaggaagcgatg
gacccggccttcaccacttaccagaagcaagtggtcaagaacgccaaggcgatggcgtcc
gtgttcctggagcgcggcttcgaagtcgtctccggcggcaccgaagaccacctgttcctg
ctgtctctggtcaagcagggcctgaccggcaaggacgctgacgctgcgctgggccgtgcc
cacatcaccgtcaacaagaacgccgtaccgggtgacccgcagtcgccgttcgtcacctcc
ggtctgcgtatcggtaccccggccgtcaccacgcgtggcttccaggagcaggagtgtttg
gaactggccggctggatctgcgatatcctcgatgcgatggtcgccggcgattccgccgct
gccgaagccgaggtgcaggccaaggtctccgccgtctgtgcacgtctgccggtctacgcc
tga
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