Cobetia amphilecti: LCW13_13360
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Entry
LCW13_13360 CDS
T07922
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
camh
Cobetia amphilecti
Pathway
camh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LCW13_13360 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
camh03019
]
LCW13_13360 (groL)
03110 Chaperones and folding catalysts [BR:
camh03110
]
LCW13_13360 (groL)
03029 Mitochondrial biogenesis [BR:
camh03029
]
LCW13_13360 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
camh04147
]
LCW13_13360 (groL)
Enzymes [BR:
camh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LCW13_13360 (groL)
Messenger RNA biogenesis [BR:
camh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LCW13_13360 (groL)
Chaperones and folding catalysts [BR:
camh03110
]
Heat shock proteins
HSP60 / Chaperonin
LCW13_13360 (groL)
Mitochondrial biogenesis [BR:
camh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LCW13_13360 (groL)
Exosome [BR:
camh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LCW13_13360 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LCW13_13360 (groL)
Exosomal proteins of breast cancer cells
LCW13_13360 (groL)
Exosomal proteins of colorectal cancer cells
LCW13_13360 (groL)
Exosomal proteins of bladder cancer cells
LCW13_13360 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UBU48010
LinkDB
All DBs
Position
3176334..3177983
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKDVRFSDDARKRMARGVNVLADAVKTTLGPKGRNVVLEKSFGAPTVTKDGVSVAKEI
ELKDRFENMGAQMVKEVASKTSDVAGDGTTTATVLAQSIVNEGLKGVTAGMNPMDLKRGI
DKAVIEAVKAVRELSVPCTDTKAIAQVGTISANGDSRIGEIIAEAMEKVGKEGVITVDEG
RGFEDELEVVEGMQFDRGYLSPYFVTNQDTMAVELEDPYILLVDKKISNIRELLPVLEGV
AKSGKPLAIIAEDIEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEVGLNLEQANLDHLGTAKRVTMSKENTTIIDGAGNEGDIEARVAQIRAQIEETSSDY
DREKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVEDALHSTRAAVEEGVVPGGGTALV
RVLGQLVDLKGDNEDQTHGIAIALRAMEAPLRQIVTNAGEEASVVLNNVKAGEGNYGYNA
STGVYGDMFEMGVLDPAKVTRSALQSAASIGGLMITTECMIAEDPEDKAAAGGGDMGGMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaagacgttcgtttctccgatgatgcacgcaagcgcatggcgcgtggtgtc
aatgtcctggccgacgcggtcaagactaccctcggcccgaaaggccgtaacgtggtactg
gaaaaatccttcggcgctccgaccgtcaccaaggacggcgtttccgtcgccaaggaaatc
gagctgaaggaccgcttcgagaacatgggcgcccagatggtcaaggaagtcgcttccaag
acttctgacgtggctggcgacggcactaccaccgccaccgtgctggctcagtccatcgtc
aacgaaggcctgaaaggcgtgaccgcgggcatgaacccgatggacctgaagcgcggcatc
gacaaggctgtcatcgaagccgtcaaggccgtgcgtgagctgtccgtgccgtgcaccgat
accaaggccatcgcccaggtcggcaccatctccgccaatggcgactctcgcatcggcgag
atcatcgcggaagcgatggagaaggtcggcaaggaaggcgtcatcaccgtcgatgaaggt
cgtggcttcgaagacgagctggaagtggtcgaaggcatgcagttcgatcgcggttacctg
tctccttacttcgtcaccaaccaggacaccatggcggtcgaactcgaagacccgtacatc
ctgctggtcgacaagaagatctccaacatccgcgaactgctgccggtgctggaaggcgtt
gccaagtccggcaagccgctggcgatcatcgccgaagacatcgaaggcgaagcgctggcg
actctggtcgtcaacaccatgcgcggtatcgtcaaggtcgctgccgtcaaggcaccgggc
ttcggtgaccgtcgcaaggccatgctgcaggacatcgctgtcctgaccggtggcaccgtg
atttccgaagaagtcggcctcaacctcgaacaggccaacctggaccacctgggcaccgcc
aagcgcgtgaccatgtccaaggaaaacaccaccatcatcgatggcgccggcaacgaaggc
gatatcgaagcacgcgttgcccagatccgcgctcagatcgaggaaacctcctctgattac
gaccgcgagaagctgcaggaacgtgtcgccaagctggccggcggcgttgccgtcatccgc
gtcggtgctgccaccgaagtcgagatgaaagagaagaaggctcgcgtcgaagacgccctg
cactccactcgtgcggccgtcgaggaaggcgtcgtgcctggcggcggtactgccctggtt
cgcgtgctgggtcagctggtcgacctgaaaggcgacaacgaagatcagactcacggtatc
gccatcgcactgcgtgccatggaagcgccgctgcgtcagatcgtcaccaacgccggtgaa
gaagcctctgtcgtgctcaacaacgtcaaggctggcgaaggcaactacggttacaacgcc
tctaccggcgtctacggcgacatgttcgagatgggcgtgctggatccggccaaggtgacc
cgttctgcactgcagtccgcggcctccatcggcggcctgatgatcaccaccgaatgcatg
atcgctgaagatccggaagacaaggctgctgccggcggcggcgacatgggtggtatgggc
ggcatgggtggcatgggcggcatgatgtaa
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