Cobetia amphilecti: LCW13_13790
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Entry
LCW13_13790 CDS
T07922
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
camh
Cobetia amphilecti
Pathway
camh03030
DNA replication
camh03430
Mismatch repair
camh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCW13_13790 (dnaX)
03430 Mismatch repair
LCW13_13790 (dnaX)
03440 Homologous recombination
LCW13_13790 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
camh03032
]
LCW13_13790 (dnaX)
03400 DNA repair and recombination proteins [BR:
camh03400
]
LCW13_13790 (dnaX)
Enzymes [BR:
camh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCW13_13790 (dnaX)
DNA replication proteins [BR:
camh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LCW13_13790 (dnaX)
DNA repair and recombination proteins [BR:
camh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LCW13_13790 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_5
AAA_14
AAA_18
AAA_16
AAA_2
AAA_30
AAA_19
TsaE
Mg_chelatase
nSTAND3
AAA_28
PIF1
AAA_24
ABC_tran
Rad17
Motif
Other DBs
NCBI-ProteinID:
UBU48093
LinkDB
All DBs
Position
complement(3281871..3284144)
Genome browser
AA seq
757 aa
AA seq
DB search
MSYQVLARKWRPRNFHELIGQEHVSRALVNALDQGRLHHAYLFTGTRGVGKTTLARILAK
CLNCEEGVSSRPCGVCGTCREIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTQGRY
KVYLIDEVHMLSTHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFTLKNMPP
VRVVEHLSDILAREEVSFEEDALWLLGKAADGSMRDAMSLTDQAIAFGHGQVRREDVAAM
LGTLDHRHVLALLECLASLDAASLLAEVATLAEQGPDYGGVLDDMASVFHRLAIAQMVPS
ALDNGHGDRDALLALASRFTGEDVQLYYQIALQGRGDMANAPDARTALEMTLLRMLAFRP
QGVPRPAQTPLPMTGQAEGANAPGAQAPAPVQQAPVQQAPVQQAPAQQAPVQEAPVQQAP
VQQAQPQQAPAAPMAPAPQPAAPVAAPATEAHPPMADEPPPWATEDASQDARDAGFRDVA
QDVPQPAAAPVSAPAPEQTAAPAQAPAAPSSAMSRLSAAFGSAPAQPEAAESSAPQPAEM
AAPQPAEAVPAALEPAEAETSAPAQPEPAAPPAPEPAVSEPVANEPVASEPAVAAQPLPE
PAPAPEPAPAAAPTPAPSAPSTDGRLNHAAWLELFPSLGLGGITRNIGAHCLVEHDDGTH
LKLRLDPAQSAMMAEVHQERIRKALAGQGVERVLEISVAPLPEGLETPHSRRIRLLGERH
VRAVEALRADPHIQSMEQQLGARLIEESVNSFEPDDF
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggtattggcgcgcaagtggcgcccgcgcaattttcacgaactgatcggt
caggagcatgtcagccgtgcgctggtcaatgccctcgatcaggggcgcctgcaccatgcc
tatctgttcaccgggacccgcggtgtcggcaagacgacgctggcgcgcatcctggccaag
tgcctgaactgtgaagagggcgtcagctccaggccgtgtggcgtttgtggcacctgtcgc
gagatcgatgagggccgcttcgtcgacctgatcgaagtcgacgccgcctcgcggaccaag
gtcgaggatacgcgtgagctgctggacaacgtccagtacgcgccgacccagggccgctac
aaggtgtacctcatcgatgaggtgcacatgctgtcgacccacagtttcaatgcgctgctc
aagacgctggaagagccgccgccccacgtgaagttcctgctcgcgaccactgatccgcag
aagctgccggtcaccatcctgtcgcgctgcctgcagttcacgctcaagaacatgccgccg
gtgcgcgtggtcgagcacctgtccgacattctcgcccgcgaggaagtcagcttcgaggaa
gacgcgctgtggctgctcggcaaggctgccgatggctcgatgcgtgacgccatgagtctg
accgatcaggcgatcgccttcggccatggtcaggtgcggcgcgaagatgtcgccgccatg
ctcggcacgctggatcaccgccatgtgctggcgctgctggagtgtctggcctcgctggac
gccgcgagtctgctggcggaggtggcgacactggccgagcaggggccggactacggcggg
gtgctggatgacatggcctccgtcttccaccgtctggcgatcgcccagatggtgccgagc
gcactggacaacgggcatggcgaccgtgatgcgctgctggcgctggccagccgtttcacc
ggtgaagacgtgcagctctattaccagatcgccctgcaggggcgtggcgacatggccaac
gccccggatgcgcgcaccgcgctggaaatgacgctgctgcgcatgctggccttccgcccg
cagggcgtgccgcgcccggcgcagacgccgctgccgatgaccggccaggcggagggtgcg
aacgcgcctggcgctcaagctccggcgcctgtccagcaagcgcctgttcaacaggctcct
gttcagcaagctccggctcagcaggctcctgttcaagaagctccggttcagcaggcacct
gtccagcaggctcagcctcagcaagcaccggcagccccgatggcacccgcgcctcagcct
gccgcaccagtggccgcgccagcgaccgaagcacatccgccgatggccgacgagccgccc
ccgtgggcgacggaggacgcttcgcaggacgcccgggatgccggctttcgcgacgtagcg
caagacgtgccccagccagcggccgcgccagtgtcggcgccagcgccagaacagacggca
gctcccgcacaggcgcccgctgcgcccagttcggcgatgtcacgcctgagtgccgccttc
ggttccgcgccggcgcagccagaggctgctgagtcatcggctccgcagcccgctgaaatg
gcagcgccgcagcccgctgaagccgtaccagcagcgctagagcccgctgaagctgaaacg
tcagcaccagcacagcccgagcccgctgcaccgccggcgcctgagccggccgtgtctgag
ccggtcgcaaacgagccggtcgccagcgagccagccgtggcagcgcaaccgctgccggag
cctgctcccgcaccggagccggcacccgcggctgctcccacgccggcgccgagcgccccg
agtaccgatggtcgcttgaatcacgccgcgtggctggagctgttcccctcactggggctg
ggcggcatcacgcgcaatatcggcgcgcattgcctggtcgagcacgatgacggcacccac
ctcaagttgaggctggaccccgcccagtcggcgatgatggccgaagtccatcaggagcgc
attcgcaaggcgctggcgggccagggcgtggagcgtgtgctggagatcagcgtcgcgccg
ctgccggaaggtctggaaacgccgcacagtcgtcgcattcgtctgctgggcgaacgtcat
gtgcgcgcggttgaagccttgcgtgctgacccgcatatccagtccatggagcaacagctg
ggcgcacgtctgatcgaggaaagcgtcaactccttcgagccggacgatttctga
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