Cobetia amphilecti: LCW13_14005
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Entry
LCW13_14005 CDS
T07922
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
camh
Cobetia amphilecti
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
camh03016
]
LCW13_14005 (trmA)
Enzymes [BR:
camh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
LCW13_14005 (trmA)
Transfer RNA biogenesis [BR:
camh03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
LCW13_14005 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
MTS
Methyltransf_31
Methyltransf_15
Methyltransf_11
Methyltransf_12
Methyltransf_4
RrnaAD
DREV
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
UBU48126
LinkDB
All DBs
Position
complement(3328870..3330000)
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AA seq
376 aa
AA seq
DB search
MAIAVVDPSQYEQQLAEKAEQTRARFAAFDAPELEVFPSPPSHYRMRCEFRIWHEDDDLY
YAMFEVEFDDEGNKKKTVVRMDDFPVASQRINELMPLLRERLKASPVLRERLFQCEFLTT
LSGEALVTLIYHRKLGEDWEAEARALEEELDIMIIGRSRKQHIVLTRDHVFERLEVDGRE
YVYQQVENSFTQPNAEICRSMLSWARDVTHPDKAQAEGREQGDLVELYCGNGNFTIALAE
NFRRVLATEISRTSVASAQVNLAANAIDNAQVARMSAEDFSLALAGEKAGRRVAEMDLDN
HDFRTVLVDPPRAGLDADSCEQTARYERIVYISCNPQTLIDNLEVLCRTHRIERFALFDQ
FPYTDHLECGVYLVRR
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcgccgtcgtcgatcccagtcagtatgaacagcagctcgccgagaaggccgag
cagacccgcgcacgtttcgctgcctttgatgcgccggaactcgaggtgtttccctcgccg
cccagccattaccgcatgcggtgcgagttccgtatctggcacgaggatgatgacctctat
tacgcgatgttcgaggtcgagttcgacgacgagggcaacaagaagaagacggtcgtgcgc
atggacgacttcccggtcgccagccagcgcatcaatgaattgatgccgctgctgcgtgag
cgcctcaaggcaagcccggtgctgcgcgagcgtctgttccagtgcgagttcctcaccacc
ctgagcggcgaggcactggtcacgctgatctaccatcgcaagctcggcgaagactgggaa
gccgaggcgcgtgcgctggaagaagagctcgacatcatgatcatcgggcgttcgcgcaag
cagcatatcgtgctgacgcgcgatcacgtcttcgagcgtctcgaggtcgatggccgcgag
tacgtctatcagcaggtcgagaacagctttacccagcccaatgccgagatctgccgctcg
atgctcagctgggcacgtgacgtgacccatcctgacaaggcgcaggcggaaggccgtgag
cagggcgatctggtcgagctctactgcggcaacggcaacttcaccatcgcgctggccgag
aacttccgccgcgtgctggccaccgagatctcacgcacttccgtggcctcggcgcaggtc
aacctggcggccaacgccatcgacaatgcccaggtggcgcgcatgtcggccgaggacttc
tcgctggcgctggcgggcgagaaggcgggccgtcgtgtcgcggagatggacctcgacaac
cacgacttccgcaccgtgctggtcgatccgccgcgtgccggcctcgatgccgacagctgc
gagcagaccgcgcgttacgagcgcatcgtctatatctcctgcaacccgcagacgctgatc
gacaaccttgaggtgctgtgccgcacgcaccgtatcgaacgcttcgcgctgttcgatcag
ttcccgtataccgaccacctcgagtgtggtgtctatctggttcgcagataa
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