Cobetia amphilecti: LCW13_14360
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Entry
LCW13_14360 CDS
T07922
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
camh
Cobetia amphilecti
Pathway
camh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LCW13_14360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
camh02000
]
LCW13_14360
02044 Secretion system [BR:
camh02044
]
LCW13_14360
Transporters [BR:
camh02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LCW13_14360
Secretion system [BR:
camh02044
]
Type I secretion system
Adhesin protein transporter
LCW13_14360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
Peptidase_C39
MMR_HSR1
AAA_29
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
UBU48193
LinkDB
All DBs
Position
complement(3421323..3423497)
Genome browser
AA seq
724 aa
AA seq
DB search
MSDQPTPLRPEPVGEREGDPLLNALVFMARYHGNPRSAAVLVDGLPMEEGRLPLALVSRA
AARANLSAKLVNQQITAISDMLMPCILILKEERAVVLLEVDNDAGKARIHQPEADGDELV
DIESLAERHDGRVVYLKQEHRFDERAPETLKQSDGHWFWSTLKLSRPIYRDVILASILIN
LFAVASPLFVMNAYDKVVPNLAFNTLWVLATGMAIIMVFDFVMRQTRAYFMDTAGKKSEV
LLTSKLFSKTMNLRMEARPGSVGGYVKHLQEFDSIREFFTSATLTTLVDLPFALLFLLVI
WIVAGPLVLVPFAALVILLVYSLAIQKPLRSSIEQGSRLATERNARLVEAVSGLESLKLA
NAQGETQRRYERAVGQIAHWGVKSRNLTTSVSSLSMSLTQATTVALVVFGVYLIADARLS
VGGLIAAVMLSGRALQPLGQLALLITRIGQTRSAMSALEQIMALPEESEDRRYVHREHLQ
MRIEFDRVGFAYAPNTPPAVSDISLTINPGERIAIIGRIGAGKSTLQRLVSGLYRATAGS
VRIDGLDLNQLHPADVRRHIGHAGQDSSLFFGSIRDNITLGQPHASDVQVDLAADASGVT
EFTRHHPEGLDRQVGEGGRMLSSGQRQTVLLARALLMRPPLLLLDEPGSHMDNRAELRLR
RMLKSLPRSQTLLLVTHKSSMLDVVDRVIVMEGGRIVADGPKQQVLSALNEGRVAGRKQE
VNRG
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgatcaacccacgccattaagaccggagcccgttggcgagagggaaggcgacccc
cttctcaatgcgctggtcttcatggcgcgttaccacggcaatcccagatctgcagcagtg
ctggtcgatggtcttcccatggaggaaggccgtcttcccctggcgcttgtcagtcgtgcc
gcggcacgtgccaatctgagtgccaaactggtcaaccagcagatcacggccatcagcgac
atgctgatgccgtgcattctgatactcaaggaagagcgtgctgtcgtcttgctggaggtc
gacaacgacgcaggcaaggccaggattcatcagcctgaggccgatggtgatgagctggtc
gacatcgagtctctggctgagcgtcatgatgggcgtgtcgtctatctcaagcaggagcac
cgctttgatgaacgcgcaccggaaacgctcaagcagagcgatggccattggttctggtca
acgctgaagctgtcgcggccgatctatcgtgacgtgattctggcgtcgatattgatcaac
ctgtttgccgtggcatcgccactgttcgtgatgaacgcctatgacaaggtcgtgcccaac
ctggccttcaacacgctgtgggtcttggcgacgggtatggcgatcatcatggtgttcgac
ttcgtgatgcgccagacacgcgcctacttcatggacacggccggcaagaagtcagaggtg
ttgctgacctcgaagctcttctccaagaccatgaacctgcggatggaagcgcgtcccggc
tccgtcggtggctatgtgaagcacctgcaggagttcgattcgatccgcgagttctttacc
tccgcgaccctgaccaccctggtcgatctgccgtttgccctgctgttcctgctggtgatc
tggatcgtggcggggccattggttctggtgcccttcgccgcgctcgtgatcctgcttgtc
tacagtctggcgatccagaaaccgctgcgcagcagtatcgagcaggggtcgcgcctggcg
acggaacgcaatgcgcgcctcgtcgaagccgtctccggcctcgagagcctcaagctggcc
aatgctcagggcgaaacccagcgtcgatatgaacgcgccgtcgggcagatcgcgcattgg
ggggtgaaaagccgcaacctgacgacctctgtcagctcgttgagcatgtcgctgacacaa
gccaccacggtggcgctggtcgtgttcggggtctatctgatcgcggatgcacgcctgtct
gtcggtggcttgattgccgcggtcatgctgtccgggcgtgcgttgcagccgctggggcag
ttggcgttgctgatcacgcgcatcggccagactcgcagtgccatgagtgcgcttgagcag
atcatggcattgccggaagagtcggaagatcgtcgttacgttcaccgcgagcacctgcag
atgcgcatcgaattcgaccgcgtcggctttgcctatgcgccgaatacgccgcctgccgtg
tcggatatctcattgaccatcaatccaggtgagaggatcgcgatcatcgggcgtatcggt
gctggcaagagtaccttgcagcgtcttgtctctggcctgtatcgcgccacggcgggcagc
gttcgaatcgatggactggatctcaatcagctgcatcccgccgacgtacgtcggcatatc
ggtcatgcgggccaggacagttcactgttcttcggctccattcgcgacaacatcaccctc
ggccaaccacacgccagtgatgtacaggtcgacctcgcggctgatgcctccggtgtgacc
gaattcactcgtcatcaccctgaaggactggaccgtcaggtgggtgagggtgggcgcatg
ctctccagcggtcagcgtcagacggtcttgctggcacgcgcactcttgatgcgtcctccg
ctcttgctgctcgatgagcccgggtcgcacatggataaccgcgccgagctgcgcctgcgc
agaatgctcaagtccctgccacgcagccagacgctgctgctggtcacccacaagagcagc
atgctcgacgtggtagaccgcgtcatcgtcatggaaggagggcgcatcgtcgccgatggt
cccaagcagcaggtgctgagcgccctgaatgaaggccgtgtcgctgggcgcaagcaggag
gtgaatcgtggctaa
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