Cobetia amphilecti: LCW13_14590
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Entry
LCW13_14590 CDS
T07922
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
camh
Cobetia amphilecti
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
camh03009
]
LCW13_14590 (rsmB)
Enzymes [BR:
camh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
LCW13_14590 (rsmB)
Ribosome biogenesis [BR:
camh03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LCW13_14590 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
Methyltransf_31
Methyltransf_11
Methyltr_RsmF_N
Motif
Other DBs
NCBI-ProteinID:
UBU48232
LinkDB
All DBs
Position
3493404..3494855
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AA seq
483 aa
AA seq
DB search
MSQSDNPSSKGNGKKRNSLPPARSKGGAHKHGGARRKPDNAPASPGAAVRVAAARTLAPV
LAARTSLNLDSLPSGVAGRDQGLYKALCFGVCRQLPRLDALAGKLLKSSFKSQDQDIHAL
LLLGLYQLLYMRIAPHAAVGETAGAARGLGKGWATGVLNACLRRFQREQEALEAEVDKDP
AVALSHPQWLLDTFQRNWPDDWQAIAEANNAQAPMTLRVNVAAISRDDYLAQLAEAEIEG
VACPFAEHGITLTSACDVSALPGFEEGLVSVQDEAAQLAGQLLAPAVTAINAEGEGVRLL
DACTAPGGKLADMLERFPGLDATAIDIDGERLERVEETLERLELGAGVVCADASERDWWD
GEVFDVILLDAPCSGSGVIRRHPDIKLLRRPNDIGDLARLQGKLLANLWGMLKPGGTLVY
GTCSIITQENARVMDRFLAATPDAKAETIKADWGRVSGAGRQMLPQVNGHDGFYLAHITK
ASA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtcagacaacccgtcctccaagggcaacggcaagaagcgcaactccctgccg
ccggcccgcagcaagggcggcgctcacaagcatggcggcgcccgtcgcaagcctgacaat
gcaccggcctcgccgggcgctgcggtgcgtgtcgcggccgcgcggacgctggccccggtg
ctggccgcgcgcacctcgctgaacctggacagcctgccgtccggcgtcgccgggcgtgac
cagggcctctacaaggcactgtgcttcggcgtctgccgtcagctgccgcgtctggatgcc
ttggcgggcaagcttttgaagtcgtccttcaagtcgcaggatcaggacatccacgccctg
ctgctgctcggcctctatcagctgctgtacatgcgcatcgccccgcacgccgccgtcggt
gagaccgctggcgctgcccgtggcctgggcaagggctgggccaccggcgtgctcaacgcc
tgtctgcgtcgtttccagcgtgagcaggaagcgctggaagccgaggtcgacaaggacccc
gccgtcgccctgtcccacccccagtggctgctggataccttccagcgcaactggccggac
gactggcaggccatcgccgaggccaacaacgcccaggcgccgatgacactgcgcgtcaat
gtcgccgccatcagccgcgatgactacctcgcccagctggcggaagccgagatcgaaggc
gtggcctgcccgttcgccgagcacggcatcaccctgaccagcgcctgcgacgtcagcgcc
ctgccgggcttcgaggaaggcctggtcagcgtgcaggatgaagcggcacagctggccggc
cagctgctggcgccggccgtgaccgccatcaacgccgagggtgaaggcgtgcgcctgctg
gatgcctgcaccgcgccgggcggcaagctggcggacatgctggagcgcttcccgggcctg
gacgccaccgccatcgacatcgacggcgagcgcctcgagcgcgtggaagagacgctggag
cgtctggaactgggtgccggtgtcgtatgtgccgatgccagcgaacgcgactggtgggac
ggcgaagtcttcgacgtcatcctgctcgacgcgccctgctccggcagtggcgtcatccgt
cgtcacccggacatcaagctactgcgtcgcccgaacgacatcggcgatctggcgcgcctg
cagggcaagctgctggccaatctgtggggcatgctcaagcccggcggcaccctggtctac
ggcacctgctccatcatcacccaggaaaacgcccgcgtgatggaccgcttcctggccgcg
acgccggacgccaaggccgagaccatcaaggccgactggggccgtgtctcaggtgctggc
cgtcagatgctgccgcaggtcaatggccacgacggcttctacctggcccacatcaccaag
gccagcgcctga
DBGET
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