Cobetia amphilecti: LCW13_15375
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Entry
LCW13_15375 CDS
T07922
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
camh
Cobetia amphilecti
Pathway
camh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LCW13_15375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
camh03400
]
LCW13_15375
Enzymes [BR:
camh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCW13_15375
DNA repair and recombination proteins [BR:
camh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LCW13_15375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
HypA
AAA_30
TrwB_AAD_bind
Zn_ribbon_6
WHD_PriA
Motif
Other DBs
NCBI-ProteinID:
UBU48363
LinkDB
All DBs
Position
3693930..3696188
Genome browser
AA seq
752 aa
AA seq
DB search
MPDTTDKTAIHLPGRVLGIAIPGPLRDLFDYLPSRQPPRHGWQVGLRVRVEFGRRQLVGV
IAELRSDSSFPIDKLKPVSEVIDDEPLPADWLWICQFTARYYQHSLGDTFAQAMPSLLRQ
GRALEARTRERWTLTDKGRATEPASLGRATRQIALLELLAQHRHGLVHSAITAQGFTRQQ
LETLRGRGYIESREEPVTGTTPEQANKGVLAAPGLALNDEQGRALSRLHEGLSRFSPTLL
EGVTGSGKTEVYLQLIEAVLDRGGQALVLVPEIGLTPQTLERFRRRFRVPQVMLHSGVSD
GERLDGFEAARSGRARIVIGTRSAIFTPMARLGVIIVDEEHDGSFKQQDGLRYHARDLAL
VRGKQEGIPVVLGSATPSLESLRHAREGRFTHLHLHQRAGRSQPARLHPVDLRGRMTLGG
LSTQSLEAIEKRLAQGDQVLVFINRRGFAPTLTCHACGWIAECDNCDARMTLHRHPPQLT
CHHCERTRPLPDACPACGSGDVRPQGAGTERTEELLGEKFPDVPVLRIDRDSTQRKDAMS
EALAVIRRGEPCLLVGTQMLAKGHHFPHVTLVVVVNADSGLYAADFRALEQSAQLLVQVA
GRAGRAERPGEVLIQTRHPEDPNLLTLIQAGYPQLAGELLEERRIAQLPPFSHLALLRAE
ASDQQQVEQWLLKVGGALRQHLEAANLKVDCLGPVPAPMERRQNRYHAQLLLRCAKRGPL
HEAAAWLVTLCEQDRDARRLRWSLDVDPIGMA
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgacactaccgacaagactgcgattcacctgccgggacgtgtgctgggcatcgcg
attcccggcccgctgcgcgatctgttcgactacctgccatcccgccagccgccacgccac
ggctggcaggtgggcctgcgcgtgcgcgtcgaattcgggcgtcgccagctggtcggggtg
atcgccgagctgcgcagcgactcaagtttccccatcgacaagctcaagcctgtcagcgaa
gtcatcgatgacgaaccactgccggccgactggttgtggatatgtcagtttaccgcgcgc
tattaccagcactcgctcggcgacaccttcgcccaggcgatgccctcgctgctgcgtcag
gggcgcgccctggaggcgcgtacccgtgagcgctggacgctgaccgacaagggccgcgcc
accgagccggcaagcctggggcgagccacccgccagatcgcgttgctggagctgctcgct
cagcatcgtcatggcctggtgcacagcgccatcaccgcccagggcttcacccgccagcag
ctggagaccctgcgcggtcgcggctacatcgaatcccgtgaggagccggtgaccggcacc
acgccggagcaggccaacaagggcgtgctcgccgcacccggcctggccctcaatgatgag
cagggccgcgccctctcgcgtctgcatgagggcctgagccgcttctcgcccacgctgctg
gagggcgtgaccggttccggcaagaccgaggtctatctgcaattgatcgaggcggtgctg
gaccgcggcggccaggcgctggtgctggtgcccgagatcggcctgacgccccagacactg
gagcgcttccgcagacgcttccgcgtgccgcaggtgatgctgcactccggcgtcagcgat
ggtgaacgcctcgatggcttcgaagccgcccgcagcggccgggcgcgcatcgtgatcggt
acccgctccgccatcttcacgccgatggccaggctcggcgtgatcatcgtcgacgaggag
cacgacggctccttcaagcaacaggacggcctgcgctatcacgcccgcgatctggcgctg
gtgcgcggcaagcaggaaggcatacccgtggtgctcggcagcgccacgccgtctcttgag
agcctgcgccatgctcgcgagggccgcttcacgcatctgcacctgcatcagcgcgccgga
cgcagtcagccggcccgcctgcacccggtcgacctgcgcggccgcatgacgctgggcggt
ctctcgacccagagtctggaggcgatcgagaagcgcctcgcccagggcgatcaggtgctg
gtgttcatcaatcggcgcggcttcgcgccgaccctgacctgccatgcctgcggctggatc
gccgaatgcgacaactgcgatgcccgcatgaccctgcatcgccatccgccccagctgacc
tgccaccactgcgagcgcacccgcccgctgccggatgcctgcccggcctgtggcagcggg
gatgtacgcccgcagggcgcgggtaccgagcgcaccgaagagctgctcggcgagaaattc
cccgacgtgccggtgctgcgcatcgaccgcgacagcacccagcgcaaggacgccatgagc
gaggcgctggcggtgatccggcgtggcgagccctgcctgctggtcggcacccagatgctg
gccaagggccaccacttcccccacgtcaccctggtggtggtggtcaacgccgacagcggc
ctctatgccgccgacttccgcgcacttgagcaatccgcgcagctgctggtacaggtcgcg
gggcgcgccggacgcgccgagcgccccggcgaggtattgatccagacccgccacccggaa
gaccccaacctgctgacgctgattcaggccggctacccgcagctggcgggggaattgctc
gaggagcgccgcattgcccagctgccgccgttcagccatctggcgctgctgcgcgccgag
gccagcgaccagcagcaggtcgagcagtggctattgaaggtcggtggcgccctgcgccag
cacctcgaggctgccaatctcaaggtggattgcctcggtccggtacccgcaccgatggag
cgccgccagaatcgctatcacgcccaattgctgttgcgctgtgcgaaacgcggcccattg
catgaagcggcggcctggctggtgacgctctgcgagcaggaccgcgacgcacgccgcctg
cgctggtcgctggatgtcgatcccatcggcatggcctga
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