Cobetia amphilecti: LCW13_16245
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Entry
LCW13_16245 CDS
T07922
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
camh
Cobetia amphilecti
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
camh02044
]
LCW13_16245
02035 Bacterial motility proteins [BR:
camh02035
]
LCW13_16245
Secretion system [BR:
camh02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
LCW13_16245
Bacterial motility proteins [BR:
camh02035
]
Pilus system
Pilus assembly proteins
LCW13_16245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
PQQ
PQQ_3
VWA_2
Motif
Other DBs
NCBI-ProteinID:
UBU48513
LinkDB
All DBs
Position
complement(3896410..3899994)
Genome browser
AA seq
1194 aa
AA seq
DB search
MRYLLSGALCLVALPCLAAPGEIARAPVTEATGVQPNILFILDDSGSMAWEDTLNKGVEH
WGYQPASSVLGNSGVYSINAGVVSHRTQNTIARAIGSCNGFNVLAYDPELTYTPWAGKDR
FGVEYADATLLTARSNPYEPTSTVNLTGVYYMPWTDNDGDGEYDFEECGLYQSGSSLYVD
NTRQTYINQQSAAQKTNFANWFTYYRDRMSVAKSAMAGVIDANESRVGLRTIQGRNNRNV
ADMTDVDEREDLLEELFTAYPSGGTPLRTALKNAGEYYSSTGSNAPILSADEGGMCQQNY
SIMMSDGYWNGSSPSVGNVDGGSGDHISASHRDSHSNTLGDVAMKYYREDLRTDLIDSVP
TIPGVDENSAQHMVTYTVAFGVDGSLSENPADLESAFTWPQPSANTNTTIDDLRHAAWNG
RGEYLSAANPQALIDALNNIAQSIAGRAASTGSLDISSGGQTSGAYVIQTIYDPADWSGD
VVARKIGTNGALSATSDWSVAEWLRDDDSRSSSRKVITYNPGISEVDEKAFFFNIEEAGS
LEAEQVLDLVGFLDETLLSETLLATLRRTVRDDDDDDDDDDDDDDDGILGGVGSVVGGVT
SGVTQLTGRVLDTTGTFLKLDGANLGVRTSDLENLIGYLKGDDAYEGTLFRERDDNYLGD
IVHASPAIVGPPSASYRNDMEVSSYRSFKTLYEERQNMIYIGANDGMLHAIDMETGEEKF
AYMPYAAFSIESGRGIRQLADQNYVHQYYVDATPVARDVHVQLGDEDAPGWHSVLLGGLG
AGGKAVYMLDITDPEGFESLGESDGTSPAEIVQWEFTHEDLGYTFSDIQVARLDDGKWYA
IFGNGYNADSDGRAKLFIVDLEDPDNYALLDSQQGSNAGGSCTSGSSDCNGMSSPELADV
DADGITDWVYAGDLHGNVWVFDMREFSLSNIGSSEMSRLFQSCAVALNSTSSTCPAASRQ
PITSRVAVARSGVFNSTVDTPYLNVYWGTGQLLTLQDAVDTSTQSFYSVLHTGSSTRRHH
GQLEKQSFSNISGVSDARTVTGVGVDYSNQNNNGMQYGWYLELPDSGERLVTIPAVRGDL
IVFNTTIPGSNGPCTGGASGWLNALSLRNGLQPVRSYNNVQQVFDYNDDGEVNASDNVNN
QVVLSIKTEGEPTSPKFLGDTQYVGQGGTNQVVEMAMDFGIDGLEGRSAWYQLR
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgcgttatctgctgagtggtgccctgtgccttgtcgccttgccctgtctggcggccccc
ggggaaatcgcccgcgccccggtcacggaagcgaccggggttcagcccaatatcctgttc
attctggatgattcgggcagcatggcctgggaggacactctcaacaagggagtggaacac
tgggggtatcagccggcttcctcggtgcttgggaactccggggtctactcgatcaatgcc
ggggtcgtcagccatcgcacccagaacaccatcgctcgggccatcggctcgtgcaatggt
ttcaatgtgctggcctacgatccggagctgacctacaccccttgggcgggcaaggaccgc
tttggggtggagtacgcagatgccacgttgttgacggcgcgttcaaatccttatgagccg
acgtccaccgtcaacctcaccggggtctactacatgccctggacggataatgatggtgat
ggagagtatgacttcgaggagtgtggcctctatcaaagcggcagcagcctctatgtggac
aacacacgtcagacctacatcaaccagcagtccgccgcgcagaagaccaacttcgccaac
tggttcacgtattaccgtgaccgcatgtccgtggccaaatccgccatggccggcgtgatc
gacgccaacgagtcccgggtcgggctacgtaccatccagggtcgcaacaatcgcaacgtt
gcggacatgacggatgtcgatgagcgtgaagacctgctggaggagctgtttaccgcctat
ccctccggtggcacccctctgcgtaccgcgctcaagaatgccggtgagtattattccagc
actggaagcaatgctcccatcctgagtgcggatgagggcggcatgtgccagcagaactat
tccatcatgatgagcgatggctactggaatggctccagccccagtgtcggcaacgtcgat
ggtggcagcggtgatcacatcagtgccagtcaccgtgacagccattccaatacgcttggc
gatgtcgcgatgaaatattatcgcgaggacctgcggactgacttgatcgacagcgtgcct
accataccgggagtggatgaaaactccgctcagcacatggtgacctacaccgtcgctttc
ggtgtggatggctcgctgtccgagaaccctgctgatctcgagtctgccttcacctggccg
cagccttccgccaataccaataccaccatcgatgatctgcgccatgcggcctggaacgga
cgtggtgaatatctcagcgccgccaatccgcaggcattgattgatgcgctgaacaatatc
gcgcagtccatcgcagggcgcgcggccagcaccggtagcctggacatcagcagtggtggg
cagaccagcggcgcttatgtgatccagaccatctatgatcccgccgattggtcgggcgat
gtcgttgcacgcaagatcggcaccaatggcgccttgagcgccacctcggactggtccgtc
gcggagtggttgcgtgacgatgatagccgtagctccagccgcaaggtgatcacctacaac
ccggggatctccgaagtggatgaaaaggcgttcttcttcaatatcgaggaggccggatca
ctggaggccgaacaggtactggacctcgtgggcttcctcgatgagaccctgctgtcagaa
acactgctggcaacgctgcggagaaccgtccgggatgatgacgacgacgacgacgacgac
gacgacgacgatgatgatggcattcttggcggagtcggctcagtggtcggaggcgtcacc
agtggcgtgactcagctgacgggacgcgtcctggatactaccggtaccttcctgaagctg
gatggcgctaaccttggtgtcagaacgtcggatctcgagaatctgatcggctacctcaag
ggtgatgatgcctacgaaggcaccttgttccgcgagcgtgacgacaactatctcggagat
atcgtgcatgcctcgccggcgatcgtcgggccgccttcggccagctatcgcaatgacatg
gaagtgtcttcgtaccgctccttcaagacgctgtatgaggagcgccagaacatgatctac
atcggtgccaacgacggcatgctgcacgccatcgacatggagaccggtgaagagaagttc
gcctacatgccgtatgccgccttcagcatcgagagcgggcgcggtattcgccagctcgct
gatcagaactatgtgcaccagtactatgtcgatgccactccggtcgcgcgtgacgtgcat
gtccagttgggggatgaggatgcgcccggttggcactcggtcctgctgggtgggctgggc
gctggtggcaaggcggtctacatgctggatatcaccgatcctgaaggcttcgagtcattg
ggtgaatccgacggcacctcgccggccgagatcgtgcagtgggaattcacgcacgaggac
ctcggctataccttcagcgatattcaggtagcgcgtctggatgacggcaagtggtatgcc
atcttcggcaatggctacaacgccgacagcgatgggcgtgccaagttgttcatcgtggac
ctggaagaccccgacaactatgcgctgctggattctcaacagggcagcaatgccggtgga
tcgtgcacctctggcagcagtgactgcaatggcatgtcgagccctgagctggccgacgtc
gatgccgatggcatcaccgactgggtctatgccggcgatctgcatggcaatgtctgggtg
ttcgacatgcgcgagttctcgctgagcaacatcggcagcagcgaaatgtcgcgtctgttc
cagtcatgtgccgttgccttgaacagcacgtcatcgacctgtccggcagcttcccgacag
cccatcacatcgcgggtagccgtggcacgcagcggtgtcttcaacagcaccgtcgatacg
ccgtacctgaatgtgtactggggcaccgggcaattgctgacgctgcaggatgcggtcgat
acctcgacgcaatccttctacagcgtgctgcataccgggtcttcgactcgccgtcatcat
ggccagctggaaaagcagagcttctccaatatcagcggcgtgagtgacgcgcggacggtc
acgggggtaggcgtcgattattccaatcagaacaacaatggtatgcagtacggctggtac
ctggagctaccggactccggtgagcgtctggtgaccatcccggctgtccgtggtgatctg
attgtcttcaataccaccatcccgggctccaatggcccctgtactggcggtgccagtggt
tggctgaatgcgctcagcttgcgcaacggcctgcagccggtacgcagttacaacaatgtg
cagcaggtctttgattacaacgatgatggcgaggtcaacgcgagcgacaacgtcaataat
caggtcgtactctcgatcaagacagaaggcgagcccacctcaccgaaattcctgggtgat
acccagtatgtcggtcagggtggcaccaatcaggtggtcgaaatggccatggacttcggg
atcgatgggctggaaggccgtagtgcctggtatcagctgcgctag
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