KEGG   Cobetia amphilecti: LCW13_16760
Entry
LCW13_16760       CDS       T07922                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
camh  Cobetia amphilecti
Pathway
camh02020  Two-component system
Brite
KEGG Orthology (KO) [BR:camh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LCW13_16760
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:camh02022]
    LCW13_16760
Two-component system [BR:camh02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   LCW13_16760
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_16 AAA Glyco_hydro_3 FleQ AAA_2
Other DBs
NCBI-ProteinID: UBU48603
LinkDB
Position
4003897..4005432
AA seq 511 aa
MSDVTNTDMQVLVVDDEPHLRDSLSQSLMLADYRTRPLASAEQALAILRAEAPFEGVVVT
DIRMPGMDGLSLLHAAHAVDDELPVIVMTGHGDIDTAVAAMQAGAWDFIEKPFDRERMLD
GVRRAVAARRLTLENRSLREQLDTQRNSAGPRLVGSSDIMQRLDAQVSRLAAVDADTLLY
GETGAGKDRVARCLHERSARASKPFVALNCGGMPETLIESELFGHEKGAFTGASERRIGK
LEHADGGTLFLDEIESMPMSLQIKLLRVLQERSIERLGSNTPRPIDIRVIAATKRDLREA
ASAGEFREDLYYRLNVVTLYLPPLREHAEDILQLFRHFAILASERTSLEVPPLDATTLQA
LLAHDWPGNVRELRNCAERHVLLGGLEGNIGDSMAEGRPLTAGTSGPAVNSTEATREAVR
EGITAGMGERDASGAPRESGELGELEHNVKAATQAQSLPQRMEAFEAALIREALAASKGQ
VVMACERLGLPRKTLYDKLKKHGLSAEPYRA
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgagcgacgtcacgaataccgacatgcaggtgctggtggtggatgacgaaccgcacctg
cgcgacagcctgagccagagtctgatgctggccgattaccgcactcgcccgctggccagt
gccgagcaggcgctggcgatcctgcgcgccgaagcgcccttcgagggtgtggtggtcacg
gacattcgcatgccgggcatggatggcctgagcctgctgcacgcggcgcatgccgtggat
gacgagctgccggtgatcgtgatgaccggtcatggcgacatcgacaccgccgtcgcggcc
atgcaggccggtgcctgggatttcatcgagaagcccttcgatcgcgagcgcatgctcgat
ggcgtgcggcgtgcggtggccgcccgccggctgacgctggagaaccgctcgctgcgcgaa
cagctggatacccagcgcaacagcgccggccccaggctggtcggcagcagtgacatcatg
cagcgcctggacgcccaggtgtcacgcctggcggcggtcgatgccgacaccctgctgtat
ggcgagaccggcgccggcaaggaccgtgtcgcccgctgcctgcacgagcgcagcgctcgc
gccagcaagcccttcgtggcgctcaactgtggcggcatgccggagacgttgatcgagtcg
gaactgttcggccatgagaaaggtgccttcaccggtgccagcgagcgccgcatcggcaag
ctggaacacgccgacggcggcaccctgtttctcgatgagatcgaatcgatgccgatgtcg
ttgcagatcaagctgttgcgggtgctgcaggagcgcagcatcgagcggctcggcagcaat
acgccacgccccatcgatatccgcgtcatcgccgccaccaagcgggatctgcgcgaagcg
gccagcgccggcgagtttcgcgaagacctctactaccgcctgaacgtggtcacgctgtat
ctgccgccactgcgcgagcatgccgaggatatcctgcaactgtttcggcacttcgcgatt
ctggccagcgaacgcaccagtctggaagtcccgccgctggacgccaccaccctgcaggca
ctgctggcgcatgactggccgggcaacgtgcgtgaattgagaaactgtgcggaacgccat
gtgctgcttggcgggctggagggcaacatcggcgacagcatggcggaagggcgaccgctc
accgcgggcacgagtggcccagccgtgaacagcacggaagccacaagagaggcggtcaga
gaaggcatcaccgccggcatgggcgagcgggatgcttcaggcgcaccgagggaatcaggc
gagctgggggaactggagcacaacgtgaaggcagccacgcaggcgcaatcgctgccgcag
cgcatggaggcgttcgaggccgcgctgattcgcgaggccctggcggccagcaaaggtcag
gtggtgatggcctgcgaacgactggggctgccgcgcaagacactctacgacaagctcaag
aagcacggcctgagcgccgagccctatcgtgcctga

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