Cobetia amphilecti: LCW13_16980
Help
Entry
LCW13_16980 CDS
T07922
Symbol
dcm
Name
(GenBank) DNA (cytosine-5-)-methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
camh
Cobetia amphilecti
Pathway
camh00270
Cysteine and methionine metabolism
camh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LCW13_16980 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
camh03000
]
LCW13_16980 (dcm)
03032 DNA replication proteins [BR:
camh03032
]
LCW13_16980 (dcm)
03036 Chromosome and associated proteins [BR:
camh03036
]
LCW13_16980 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
camh02048
]
LCW13_16980 (dcm)
Enzymes [BR:
camh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
LCW13_16980 (dcm)
Transcription factors [BR:
camh03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
LCW13_16980 (dcm)
DNA replication proteins [BR:
camh03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
LCW13_16980 (dcm)
Chromosome and associated proteins [BR:
camh03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
LCW13_16980 (dcm)
Prokaryotic defense system [BR:
camh02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
LCW13_16980 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
UBU48645
LinkDB
All DBs
Position
4056215..4057900
Genome browser
AA seq
561 aa
AA seq
DB search
MNHSIQVVDLFAGPGGLGEGFNSLRDDNEKRVFKTLVSVEKEASAHKTLTLRAFFRELLD
SGKDRSVYFNYLTGGPHPSSLEEYRDLWEHAEHEALSLELGDEAGNHALEERLEQGLDHS
RNWVLIGGPPCQAYSLAGRSRNKGNKEYKAEDDKRHFLYKEYLSVIARHRPGVFIMENVR
GILSSKVNGEYIFDQILSDLHEPDSAVEVTTADSVMSVQKKGYTIFSLVDDKVHYPRENS
GWFGSTPLSRDEFSSFLIKAEQYGIPQARHRVILAGVRNDLVESMGIDKIASMLKVPLHR
GGEPVPAAEVLYHSGMPELRSGLSREDSRKEWSRTIHEAAQRIIAELKEKPPVKLDSRQA
EELLDEIKSVSGHAAKGLRLERKQMVVEGAYKSSPIVSQLEEWLHGAYDRKVMPIWVNHE
TRGHIKEDLARYLYCSAYAKVTGRAPKGSEEIHLDCLAPNHANWKSGNFSDRFRVVVENQ
PSKTITSHISKDGHYFIHPDPFQCRSLTVREAARIQTFPDDYFFEGNRTQQYVQVGNAVP
PLLARQIAERVIEVLSAVNNA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaaccattcaattcaggtggtcgacctttttgcaggcccaggtggcctgggtgaagga
ttcaactccctacgggatgacaacgagaaacgcgtcttcaagacactcgtctcggtcgag
aaggaagcttccgctcacaagacactgacccttcgagccttcttccgggaactgctcgat
agcggaaaggacaggagtgtctacttcaattatctgacaggcggcccgcatccctccagc
ctcgaagaatatcgcgacctctgggaacacgcagagcatgaagcattgtcattggagctg
ggagacgaagctggcaatcatgcacttgaggagaggctcgagcaggggctggatcattcg
agaaactgggtactgataggtgggccgccctgccaggcctactcccttgccgggcgctcc
agaaacaagggcaacaaggaatacaaggcagaagatgacaagagacacttcctttacaag
gagtatctatccgttatcgcgcgccatcgccctggtgtcttcatcatggaaaacgttcgc
gggatattgtcatccaaggtcaatggtgaatacatctttgaccagatcctgtctgatcta
catgagccagactctgccgtagaggtcactaccgcggattccgtgatgtcggtgcagaag
aagggctacaccatcttttctctggtggatgacaaggttcactacccgcgcgagaacagt
ggctggtttggctctacccctctttcacgagatgagttttcctctttcctgataaaggca
gagcaatacggcataccgcaggcccgtcatcgcgtcattctggcgggtgtcagaaatgat
cttgttgaaagcatggggatcgacaagatcgccagcatgctcaaggttcctcttcacagg
ggaggtgagcctgtgcctgctgcagaggttctttatcactcaggcatgcctgaactgcgc
agtggtctgagccgcgaggattcacgtaaagagtggtccagaacgattcatgaagccgcg
caaagaatcattgctgaactgaaggagaaacctcctgtaaagcttgattcaaggcaagct
gaggagctgcttgacgagatcaagtccgtatccgggcatgcagccaaggggctacgcctt
gagcgaaagcagatggtggtagaaggggcttacaaatccagcccgatagtcagtcaactg
gaagagtggctgcatggtgcctatgacagaaaagtgatgcctatctgggtgaatcatgag
acgcgtggtcatatcaaggaagatctggcgcgttatctctattgctccgcatatgcaaag
gttaccggaagagcccccaagggctccgaagagatacacctggattgcctggcacccaat
catgccaactggaaatccggcaatttctcggatcgcttccgagtggttgtcgaaaaccag
ccatccaagacgatcacgagtcatatctccaaggatggtcactatttcatccacccggat
ccattccaatgccgtagtctgacggtcagagaagcagcacgcatccagacattcccggat
gactacttctttgagggaaaccggacacaacaatatgtccaggtgggaaatgctgtgcca
ccgctgctggcaagacagattgctgaaagggtcattgaagttttaagtgcagtcaataac
gcttga
DBGET
integrated database retrieval system
