Campylobacter fetus subsp. testudinum 03-427: CFT03427_0003
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Entry
CFT03427_0003 CDS
T02899
Symbol
gyrB
Name
(GenBank) DNA gyrase, subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
camp
Campylobacter fetus subsp. testudinum 03-427
Brite
KEGG Orthology (KO) [BR:
camp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
camp03032
]
CFT03427_0003 (gyrB)
03400 DNA repair and recombination proteins [BR:
camp03400
]
CFT03427_0003 (gyrB)
Enzymes [BR:
camp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CFT03427_0003 (gyrB)
DNA replication proteins [BR:
camp03032
]
Prokaryotic type
DNA Topoisomerases
CFT03427_0003 (gyrB)
DNA repair and recombination proteins [BR:
camp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CFT03427_0003 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AGZ80898
LinkDB
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Position
2527..4848
Genome browser
AA seq
773 aa
AA seq
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MENLEKNYGAGNIKVLKGLEAVRKRPGMYIGDTNISGLHHMIYEVVDNSIDEAMAGYCDT
ITVELTREGSAVITDNGRGIPVDIHPTEKISAATVVLTVLHAGGKFDKDTYKVSGGLHGV
GVSVVNALSKKLILNIKRDGNLYRQEFSKGIPQNILEAIKTTNRTGTSVEFWPDDEIFEV
TEFDKQILSKRFKELAYLNPKITIIFKDQRDGFNETYHFEGGLESFVSHINKSNPVSKAV
SFSGGEDDVIVDFALLYNETYTENLLSFVNNIKTPDGGTHEAGFRAGLTRAITNYIAANA
AAREKDTKITGDDIREGLIAVISVKVPEPQFEGQTKGKLGSSYVKPIVQKMTFDVLCKYF
EENPIEAKAIMNKALMAARGREAAKKARDLTRKKDSLNSVGTLPGKLADCQSKDPSESEI
YLVEGDSAGGSAKQGRDRAFQAILPLRGKILNVEKSRLDKILKSEEIKNMITAFGCGIGE
EFDSEKLRYHKIIIMTDADVDGSHIQTLLLTFFFRFLTPIIENGYVYLAQPPLYRYKKGK
KEIYLKDEKALNEFLIETGIEGEDFEGVGNKDLIDYLKIIAAYRSILMDLKKRFNVLAVI
RYMIENPDVIAKDYNELFGVIKKKLEDEKFNILNSYVNEDEIRIYVQTENGLEELVINDN
LFANPLYEEAVHIFTKMKEREIDLKRDPVEVLEEIEKNAKKGAYIQRYKGLGEMNPSQLW
ETTMNPENRRLLKIDVSNLQTASEIFELFMGDEVEPRRDYIQAHAKDVKHLDV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttagaaaaaaattatggtgctggaaatataaaagtactaaaaggtcttgaa
gctgttagaaaacgcccaggaatgtacataggtgatacaaatataagcggacttcatcat
atgatttatgaagtagttgataactctatagatgaagctatggcaggttactgtgatact
ataacagtagaacttacaagagaaggttcagctgttataacagataatggacgtggaatt
cctgttgatattcaccctacagaaaaaatttcagccgcaacagttgttttaacagtactt
cacgcaggtggtaaatttgataaagatacttataaagtttcaggaggacttcacggagtt
ggtgtttcagtcgtaaatgcactttcaaaaaaactaattcttaatataaaaagagatgga
aatttatatcgtcaagaattttcaaaaggcataccgcaaaatattttagaagctataaaa
actacaaatcgtactggaactagtgtagagttttggcctgatgatgagatatttgaagta
actgaatttgataaacaaattttatctaaaagatttaaagaattagcctatctaaatcca
aaaattactataatttttaaagatcaaagagatggttttaatgaaacttaccactttgag
ggcggacttgagagtttcgtaagtcatataaataaaagtaatccagtaagcaaagcagta
agctttagcggtggagaagatgatgttatagtcgattttgctctactttataacgaaaca
tatactgaaaatttattaagctttgtaaataacataaaaactcctgatggtggaactcac
gaagctggtttcagagctggtcttacaagagctataacaaactacatagcagcaaacgcc
gcagctcgtgaaaaagatacgaaaataactggagatgacataagagagggacttatagca
gtaattagcgtaaaagttccagaacctcagtttgagggacaaactaaaggaaaactcggt
tcaagttatgtaaaacctatagttcaaaagatgacttttgatgttttatgtaagtatttt
gaagaaaatcctatcgaagcaaaagctattatgaacaaagctcttatggctgctcgcgga
cgtgaagcggctaaaaaagcaagagatttaacacgtaaaaaagatagtttaaatagcgtt
ggaacgcttcctggcaagttagcagactgtcaaagtaaagatccaagtgagagtgaaatt
taccttgtagagggcgattctgcaggcggatcggcaaaacaaggtcgtgatagagctttt
caagctatacttccacttcgtggtaaaattttaaatgtagaaaaaagtaggcttgataaa
attctaaaaagtgaagagataaaaaatatgataaccgcgtttggttgtggtataggtgaa
gagtttgattctgaaaaattaagatatcataagatcatcattatgaccgatgcggacgtc
gatggaagccatattcaaactctacttcttacatttttctttagatttttaactccgatc
attgaaaacggatatgtttatctagcacaaccgcctctttatagatataaaaaaggtaaa
aaagaaatttatctaaaagatgaaaaagctttgaatgaattccttatagaaactggaatt
gaaggtgaggattttgaaggtgtgggaaataaagatcttatagattatctaaagataatc
gcagcttatagaagcattttaatggatcttaaaaaacgttttaatgttttagcagttata
agatatatgatagaaaatccagatgttatagcaaaagattataatgagctttttggagtg
attaagaaaaaacttgaagatgaaaaatttaatattttaaattcatatgtaaatgaagat
gagattaggatatatgttcagactgaaaacggacttgaagagcttgttataaatgataat
ttatttgcaaatcctctttatgaagaagctgttcatatatttacaaaaatgaaagaacgt
gagatagatctaaaaagagatccagtagaagtgcttgaagagatagaaaaaaatgctaaa
aaaggtgcttatatacaacgctacaaaggtcttggagagatgaacccaagccaactttgg
gaaacaactatgaacccagaaaatagacgccttttaaaaatagatgttagcaaccttcaa
acagctagtgaaatttttgaactatttatgggtgatgaggttgaacctagacgagattat
atacaagctcatgcaaaagatgtaaaacatctggatgtttga
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