Campylobacter fetus subsp. testudinum 03-427: CFT03427_0706
Help
Entry
CFT03427_0706 CDS
T02899
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
camp
Campylobacter fetus subsp. testudinum 03-427
Pathway
camp03420
Nucleotide excision repair
camp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
camp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFT03427_0706
03430 Mismatch repair
CFT03427_0706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
camp03400
]
CFT03427_0706
Enzymes [BR:
camp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFT03427_0706
DNA repair and recombination proteins [BR:
camp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFT03427_0706
MMR (mismatch excision repair)
Other MMR factors
CFT03427_0706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
CarD_TRCF_RID
eIF3_p135
DUF2340
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AGZ81574
LinkDB
All DBs
Position
complement(719393..721450)
Genome browser
AA seq
685 aa
AA seq
DB search
MDNLLDSLNKSQKEAASHIDGAMLILAGAGSGKTKTITTRLAYLISVVGIDPLNTLTLTF
TNKAASTMKHRALSMLNSNISSSPLLCTFHKFGLLFLKFYINELGRKNSFVIIDTDDKKK
IIKEFESSVAASVISNEISKYKNLLLSVEDVINSSKLNAENQFMKTNYEKIAKAYKLYEE
YLAANNLVDFDDLLALTYKILLNNNDLANEISNRYKYIMVDEYQDTNDLQYKLLRKLCEC
HENLVVVGDDDQSIYGWRGAKIENILNFKDQFNNVKLIKLEENYRSTPSILKAANELIDH
NRSRLGKELFSTKKDKYPIQIIENGDENIEARVIAGQIQKLLGSGVKADEIAILYRVNAL
SRSLEDGLNKARIPYKMVGGVKFYERMEIKDIISYLRLILNPNDDFSLNRVINRPKRGLG
KVSLAKLEKFAYENKTSIYNAIYMIDDDTIGKKLRAVLLDFANELKELSSLAPNDIPANL
EKSFGIKEYYKNLPDAIDRVANIDEFYALIKDQIQNDESFALEEFLNELALESEQDRISD
DAISIMSVHASKGLEFEHLFVIGLEEGFFPLIGDGSDIEEERRLAYVAITRAKSGLNLSF
SNSRFYKGQRARLNKSRFLSETGLCEGSLKLETSNEFKKGDLIKHKIFGIGRVMEITKIK
SEFKLKINFAGNIKEIMSSFVEKVV
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggataatctactagactctttaaacaaaagccaaaaagaagcagcctcacatatcgat
ggtgctatgttgatattagcaggagctggaagtggcaaaactaaaactattacaactaga
ctagcttacctaatcagcgtagtaggtatagatcctctaaatacattaacattaacattt
acaaacaaagccgcaagcactatgaagcatcgcgctttgtctatgctaaactcaaatatc
agttcgtctccgcttctttgcactttccataaatttggtcttttgtttttaaaattttac
ataaatgaactaggtagaaaaaatagctttgtcattatagatacagatgataaaaaaaag
atcataaaagagtttgaaagcagtgttgcagcctcagttatatcaaacgaaatttcaaaa
tacaaaaatctacttttaagcgtagaagatgttataaatagctcaaaactaaacgcagaa
aatcagtttatgaagacaaattacgaaaaaatagcaaaagcatataaactatatgaagag
tatttagccgcaaataatcttgtagattttgatgatcttttagctcttacatataaaatt
ttactaaacaataacgaccttgcaaatgagatttcaaatagatataaatatataatggta
gatgagtatcaagatacaaacgaccttcagtataaactactaagaaaattatgcgagtgt
catgaaaatctagtagtagtaggagatgatgatcaaagcatatatggttggcgtggcgca
aagatagaaaatattttaaatttcaaagatcaatttaataatgtaaaattaatcaaactt
gaagaaaactaccgctctactccatctatcttaaaagctgcaaatgagcttatagatcat
aaccgctcaagactaggaaaagagctatttagtactaaaaaagacaaatacccgattcaa
atcatagaaaacggcgatgaaaatatagaagcaagagttatagcaggtcaaattcaaaaa
ttattaggatctggcgttaaagcagatgaaatagcgatattatacagagtaaatgctttg
tctcgtagccttgaagatggcttaaataaagctagaattccatacaaaatggtaggcgga
gttaaattctatgagagaatggagataaaagatatcattagttatctaagacttatatta
aatccaaacgatgatttttctttaaaccgcgtaataaacagaccaaaacgaggtcttgga
aaagtcagccttgcaaaacttgaaaaattcgcttacgagaacaaaacatcgatttacaac
gctatatatatgatagatgatgatacgataggaaaaaagctaagagccgttttgttggat
tttgcaaatgagttaaaagagttaagctcgttagctccaaacgatatacctgcaaattta
gaaaaaagttttggtataaaagagtattataaaaatttaccagacgcgatagatagagta
gcaaatatagacgagttttatgcgcttataaaagatcaaatacaaaatgatgagagtttt
gctttagaagagtttttaaatgagttagctttagaaagcgaacaagataggataagtgat
gatgcgatatccattatgagcgttcatgcgagcaaaggacttgagttcgaacatcttttt
gttatagggcttgaagagggattttttccgcttatcggagatggaagcgatatagaagaa
gagagaagacttgcttatgtagctataactagagcaaaaagcggattaaatctttcattt
tcaaattcgagattttacaaaggtcaaagagcaagactaaataaatcaagattcttaagc
gaaacaggactttgtgaaggttcgcttaaacttgaaactagtaatgagttcaaaaaaggc
gatctcatcaaacataaaatttttggtatcggcagagttatggagataacaaagataaaa
tccgaatttaaattaaaaatcaactttgcaggaaatataaaagagataatgtcgagtttc
gtggaaaaagtagtatga
DBGET
integrated database retrieval system
