Campylobacter fetus subsp. testudinum 03-427: CFT03427_0780
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Entry
CFT03427_0780 CDS
T02899
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
camp
Campylobacter fetus subsp. testudinum 03-427
Pathway
camp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
camp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFT03427_0780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
camp03019
]
CFT03427_0780
Enzymes [BR:
camp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CFT03427_0780
Messenger RNA biogenesis [BR:
camp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CFT03427_0780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AGZ81648
LinkDB
All DBs
Position
801606..803522
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AA seq
638 aa
AA seq
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MLFSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMKGKDILAGARTGTGKTAAFALPIL
EKLSSKDRNKKRPQTRVLILVPTRELANQVTQNIKSYAKKLPFKTLPIFGGVSSYPQIQA
LKSGIDIVVATPGRLLDLALQNALNLEHIDTLIFDEADRMFDMGFIHDIKSIVKMLPDNR
QNLLFSATYPSEVMALCNSMLKDPVRIQIEEQNSTALNIIQRVILVDRDKKMELLNEVFG
VEDIDQALVFTRTKRSADKCSSYLHTLGFSVAALHGDKSQAVRSKTLEKFKNGKVKILVA
TDIAARGLDIKELPFVVNLELPNVPEDYVHRIGRTGRAGNDGVAISLVCIDEFKFLIDIE
KLIDKKLIRESFTGFEADLSVKPQPIRRGQNMNKNSERPQRDGKNGNKIDKKERKPREFN
SDKKDEPKRGRNRDDFKSEFKDRPKKDDRKQFDDKRSKFGFDKDFGIDDRETKKDGDFKR
KFKKDEPKCEYRRDGANTEFSKGKKEFSRNSRTKTSDSFDGEAKKEFKFKKDDKFKKDDK
KFGEKKPFGDKKKSFGDKKSFDDKDKKFSGEKKFGSDKKPRSSDKSSDEKYSDKKFSPKK
KFGSNRPDRNDKFAKDGSKPRASSRPRKPQSDKKSPTK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgttattttcagatttcgatctaagctctgctattttagaagcattaaaagagctaaat
tacgacgctcctacgcagatccagcaagtcgctatacctgcgataatgaaaggaaaagat
atcttagcaggagctagaacaggaacaggtaaaaccgctgcatttgccttacctatatta
gaaaaattatcgtcaaaagaccgcaacaaaaagcgtcctcaaactcgtgttttgatacta
gttcctacaagagaacttgcaaatcaagtcacgcaaaatatcaaatcttacgcgaaaaaa
ttaccatttaaaactttgcctatatttggtggagttagttcttacccacaaattcaggct
ttaaaaagtggtatagatatcgtggtggcgactcctggtagacttttggatcttgcttta
caaaacgctttaaacttagaacacatcgacacgttaatatttgacgaagctgaccgtatg
tttgatatgggatttatccacgatataaaaagtatcgtaaaaatgctacctgataataga
caaaatttgctattttccgcgacgtatccaagcgaagttatggcgctttgtaactctatg
ctaaaagatcctgtacgtatccagatagaagagcaaaacagcactgctttaaacatcata
caacgtgtgattttagtagatagagataaaaaaatggagcttttaaacgaagtttttgga
gtggaggatatagatcaagctttagtttttactcgtaccaaaagaagtgcggataaatgc
tcgtcttatctacatactttgggctttagcgtagctgctttgcacggagataaaagtcaa
gctgttcgctcaaaaacacttgaaaagtttaaaaacggcaaggtcaagatactagtcgct
acagatatagcagcgcgcggactagacataaaagagcttccgtttgttgtaaatttagag
cttccaaacgtgcctgaagattacgttcataggataggtagaacaggacgcgctggaaat
gacggcgttgcgatatctctggtttgtattgatgagtttaagttcttaatcgacattgaa
aaattgatcgataaaaagcttataagagagagttttacaggatttgaagccgatcttagt
gttaagcctcagcctatcagacgcggtcaaaatatgaacaaaaactctgaacgcccacaa
cgagatggcaaaaacggcaataaaatagataaaaaagagagaaagccaagagagtttaac
agcgataaaaaagacgagccaaaacgtggtagaaacagagatgattttaagagcgaattt
aaagatagaccaaaaaaagatgatagaaaacaattcgacgataaaagatctaaatttggc
tttgataaggactttggcatagatgatcgcgagactaaaaaagacggagattttaaacgt
aaatttaaaaaagacgagccaaaatgcgaatacagaagagacggtgctaatactgaattt
tcaaaaggtaaaaaagaattttctagaaatagtcgtacaaaaacttcagatagttttgat
ggtgaagcaaagaaagaatttaaatttaaaaaagatgataaatttaaaaaagatgataaa
aaatttggagagaaaaagccttttggtgataaaaagaaatcatttggcgataaaaaatct
tttgacgacaaagataaaaagtttagtggtgaaaagaaatttggttctgataaaaagcct
agaagtagcgacaaaagttctgatgagaaatattctgataagaaatttagcccgaaaaag
aaatttggaagcaacagaccagatagaaacgataaatttgctaaagacggctcaaaacca
agagcttcaagcagaccacgcaaaccacaatctgataaaaaatcccctacaaaatag
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