Campylobacter fetus subsp. testudinum 03-427: CFT03427_0850
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Entry
CFT03427_0850 CDS
T02899
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
camp
Campylobacter fetus subsp. testudinum 03-427
Pathway
camp02020
Two-component system
camp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
camp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CFT03427_0850 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CFT03427_0850 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
camp03021
]
CFT03427_0850 (rpoN)
Transcription machinery [BR:
camp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CFT03427_0850 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
MS_C
HTH_23
Calici_PP_N
Motif
Other DBs
NCBI-ProteinID:
AGZ81716
LinkDB
All DBs
Position
868919..870157
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AA seq
412 aa
AA seq
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MKLAQKVTQKAKLNQTLRNWLPILQVSSDELKDTLEPFIKDNPFATLEITPKKHTKNFYG
DLYKNSISDTIESSSIYKESLYEKLYSQINAPLFPTQKSIEIANLIVECINNEGYFEWDD
HKFIKFEKSEVERIRQRFAYLEPTGVGALDYKESFIFQLDDIDCDEKIYTLVQTIINDFE
NLSRYTKQKNYEDAIKIIKKFKNPPAIEYLEDDSQIIPDIFVFNNDNGIEIKVNDEFYPD
IIIDTEGIDEKNEFVSSRVKEAKDLIDALEMRKSTLYKIGLMIIEYQYDYFFGGDIKPMK
LKDIAGDLGRNPSTISRAIQNKFLSCARGIVPLKNFFAAAASEDISNAAIKDFVKNLVKT
ENHTKPLSDEAILSEIEKEFSIKLVRRTITKYRKALNIASSNERKRLYIINA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaaactagctcaaaaagttactcaaaaagctaagctaaatcagactcttagaaactgg
cttccgatactgcaagtaagcagtgatgagttaaaagatactttagagccttttataaaa
gacaatccgtttgctactttagaaataactcctaaaaaacatacgaaaaatttttacggc
gatctttataaaaattccataagtgatactatagaatcatctagcatttataaagaaagt
ttatatgaaaagctatattctcagataaatgctcctctttttcctactcaaaaatcaata
gaaattgcaaatttgatagtagaatgtataaacaatgaagggtattttgaatgggacgat
cacaaatttattaaatttgaaaaaagtgaagttgagcggataagacaaagatttgcatat
cttgagccaactggagtaggggctttggattataaagagagctttatatttcagcttgat
gatatagactgtgatgagaaaatttatactcttgtgcaaactatcatcaatgattttgaa
aacttgagtagatatacgaagcaaaaaaattatgaagacgctataaaaatcattaaaaaa
tttaaaaatccacctgccatagagtatttagaagacgatagtcagatcattcctgatatt
tttgtatttaataatgataatggtatagagataaaagtaaatgatgagttctatccagat
attattatcgacacagaaggaatcgatgaaaaaaacgagtttgtttcttcaagagtaaag
gaggcaaaagatctcatagatgctttagaaatgcgtaaatccacgctttataagataggg
cttatgataatagaatatcagtatgactacttttttggcggagatataaagcctatgaag
ctaaaagatatagccggagatttaggaagaaatccatctactatcagtagagccatacaa
aataaatttttaagctgtgctcgtggtatagttcctcttaagaatttctttgctgcagca
gctagcgaagatatatcaaacgcggctataaaagattttgtgaaaaatctcgtaaaaacc
gaaaatcacacaaaacctcttagcgatgaagccatactatctgagatagaaaaagagttc
agtataaagcttgttagaaggacgatcacaaaatacagaaaagctctaaatatagctagt
tcaaatgagagaaaacgtctatatattataaatgcttaa
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