Campylobacter fetus subsp. testudinum 03-427: CFT03427_0871
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Entry
CFT03427_0871 CDS
T02899
Symbol
uvrB
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
camp
Campylobacter fetus subsp. testudinum 03-427
Pathway
camp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
camp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFT03427_0871 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
camp03400
]
CFT03427_0871 (uvrB)
DNA repair and recombination proteins [BR:
camp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFT03427_0871 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CFT03427_0871 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
SWI2_SNF2
UB2H
Kinesin
AAA_30
Microtub_bd
Focal_AT
AAA_22
DUF1574
DUF87
HAAS
AAA_16
Flavoprotein
PIF1
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AGZ81737
LinkDB
All DBs
Position
889091..891067
Genome browser
AA seq
658 aa
AA seq
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MDKFEISSKFKPSDDQEKAITNIVDSIKSGNKFNVLLGVTGSGKTFTMANVIKRLNIPTL
IMTHNKSLAAQLYSEFKGFFPKNHVEYFISYYDYYQPEAYIPRQDLFIEKDSSINDELER
LRLSATANLLEFDDVIVVASVSANYGLGNPAEYKGMVLLLNIGMSLNQKELLLKLVDMGY
KRNDSYFDRGDFRVNGDVVDIYPAYFNDEAIRLEFFGDELDAMYHFDVLENKRTKDVSKF
ILYATSQFVVGENRLKQAIKDIELELEDRLAFYEKENRLVEYQRLKQRVEFDLEMLSSTG
STKGVENYARYLTGQKSGETPYSLFDYFEVSGKDYLVIVDESHVSLPQFRGMYAGDRSRK
EVLVEYGFRLPSALDNRPLKFDEFIAKKANYLFVSATPNEYEIDLSKGHIYEQILRPTGL
LDPRIEVISSDNQVEVLFDRAKAVIARNERVLVTTLTKKMSEELTRYYLELGIKVKYMHS
DIDAVERNELIRGLRKGDFDMLVGINLLREGLDLPEVSLVAVLDADKEGFLRSRTSLIQT
MGRAARNVNGTVILFANKITNSMKEAIDTTEARREYQNEYNKKHGITPRSASRNLEDSLK
EEDLPNLYNKAKKLEKMPASERAKIVKELRKQMLEAAKNLEFEKAAALRDEIAKLREL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggataaatttgagatatctagtaaatttaagccaagcgatgatcaagaaaaagcgata
acaaacatagttgatagcataaaatcagggaataaatttaacgtccttttaggagtaact
ggaagtggtaagacttttacgatggcaaacgtgataaaacgcctaaatataccaactctc
attatgacccataacaaaagcttagccgcgcagctttatagcgaattcaaaggctttttt
cctaaaaatcacgttgagtatttcataagctactatgactactatcaacctgaagcctat
ataccgcgtcaagatctttttatagaaaaagatagttctataaatgatgagcttgagcgt
ttaagacttagtgcgactgcaaatttgcttgagtttgacgatgtgatagtcgtggcttct
gtatctgcaaactacggtttaggaaatcctgctgagtataaaggtatggttttgttacta
aacataggtatgagtttaaatcaaaaagagctacttttaaaactagtagatatgggatat
aaaagaaatgattcgtactttgatcgtggggattttcgagtaaatggcgacgtggtagat
atctatccggcgtattttaacgatgaggctataaggcttgagttttttggagacgagctt
gacgcgatgtatcactttgatgtgttagaaaacaaacgtacaaaagatgttagtaaattt
atactatatgcaacaagccagtttgtagtcggagaaaatagactaaaacaagcgataaaa
gatatcgagcttgagcttgaagatagacttgcattttatgagaaagaaaatagattagtc
gagtatcaaagacttaagcaaagagtggagtttgaccttgagatgctctcaagcaccgga
agcaccaaaggcgtggaaaactacgcgcgttacctaacagggcaaaagtctggagagacg
ccgtactctttgtttgattactttgaagtcagtggtaaggactaccttgttatagtagat
gaaagtcacgtgagtttgccgcaatttcgcggaatgtacgcaggagatagaagcagaaaa
gaggttttagtcgagtatggttttagacttccttcagcgcttgataatagacctttgaaa
tttgatgagtttatagcaaaaaaggcgaactatctgtttgtctcagccaccccaaacgag
tatgagatagatctctcaaaaggtcatatttatgagcagatacttagacctactggactt
cttgatccacgtatagaagtcataagcagtgataatcaagtagaagttttgtttgataga
gctaaagctgtcatagcaagaaatgagcgagtactagtaacaactctaactaaaaagatg
agtgaagagctaacgcgctactatcttgagcttggtatcaaggtcaaatatatgcactca
gatatcgatgcagtagaaagaaacgagcttataagaggtcttagaaaaggcgattttgat
atgcttgttggtataaatttgcttcgtgaggggctagatctaccagaagtctctttagta
gcggttttagacgccgataaagagggttttttaagaagtcgcacgagccttatacaaact
atgggaagagcagctagaaacgtaaatggaacggttatattatttgcaaataaaataaca
aattcgatgaaagaagccatagatacaactgaagcaaggcgcgaatatcaaaatgaatac
aacaaaaagcacggtataactccgcgctcagctagtagaaatttagaagatagcttaaaa
gaagaagatctaccaaatttatataacaaagccaaaaaattagaaaaaatgccagcaagc
gagcgagcaaagattgtaaaagagctaagaaaacagatgcttgaagcggctaagaatttg
gaatttgaaaaagctgcggccttgagagatgagatagcaaaacttagagaactttaa
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