Campylobacter fetus subsp. testudinum 03-427: CFT03427_1216
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Entry
CFT03427_1216 CDS
T02899
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
camp
Campylobacter fetus subsp. testudinum 03-427
Pathway
camp03030
DNA replication
camp03430
Mismatch repair
camp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
camp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFT03427_1216 (dnaE)
03430 Mismatch repair
CFT03427_1216 (dnaE)
03440 Homologous recombination
CFT03427_1216 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
camp03032
]
CFT03427_1216 (dnaE)
03400 DNA repair and recombination proteins [BR:
camp03400
]
CFT03427_1216 (dnaE)
Enzymes [BR:
camp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFT03427_1216 (dnaE)
DNA replication proteins [BR:
camp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFT03427_1216 (dnaE)
DNA repair and recombination proteins [BR:
camp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFT03427_1216 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
Motif
Other DBs
NCBI-ProteinID:
AGZ82073
LinkDB
All DBs
Position
complement(1228528..1232523)
Genome browser
AA seq
1331 aa
AA seq
DB search
MSDFTHLHLHTEYSLLDGANKIKVLAKRLKELNIKSCAITDHGNMYGALDFYKTMKAEGI
KPIIGLEAYIHNHEDISNKESRQRFHLCLFAKNEIGYQNLMYLSSMSYIKGYYYYPRINK
KLLREHREGLVCSSACLAGEVNFHLNLSDRNLKRGAGGYESAKRVALEYKDIFGDDFYLE
IMRHGIGDQQRIDDDIIRLSMETGIKLIATNDAHYTTKDSAVAQKIFVYISANKNFDDKV
REQVLSEFYAKSADEMSAIFADMPEVIENTNEIVEKCNLEIKLGDATPPNFKFTQEYAKE
RGITLPNPQNEYDLQNDSFLFEYECRQGLEKRLEFIDPSKHQMYKDRLDLEINTINNMKF
PGYMLIVADFINEAKNRGIPVGPGRGSAAGSLVAYALRITDIDPLPYNLLFERFLNPERI
SMPDIDVDFCQNRRGEVIDYVIEKYGEYNVAQVATFGKLLAKGVIRDVARVMGMPYSEAD
AMAKLIPDELGITLKAHKNKKGDMEDGAFEKEPKIGELIAKNDLAKQVWEYSCELEGLNR
NPGMHAAGIVISNEELWKKAPLWKQSNAEAGHYVTQYTKDYLEDVDLIKFDFLGLKTLTV
IDNAKKLIKERFGVDILWEKIDFNDQKTYETIQSGNTLGIFQIESSGMQSLAAKLRPDCF
EDIIAMIALYRPGPLNSGMVDDFIDIKHGKKKIEYAFSALKPILEPTYGVIVYQEQVMQV
VQTVGGFSLGGADLVRRAMSKKKEDEMLHLKTQYLEGAKKNGFDEGKADALFELIMKFAE
YGFNKSHSAAYALITFQTAYLKTYYPAEFMAALLTSEENNIDKIIKYIDEIKRLNIKLLP
PNVNYSVREFSVIQKDGSDSIIYGMAAIKGVGVGAVEDIIKAREEGPFESVDSFISKTDC
TTVNRRVFESLIKSGAFDDFGFTRKMLIHNLETIIENSKRISDIKKNATNSLFSDDDSMN
EISVDLVNIKDEFDKKEILKFEQEILGVYVSGHPLDEYRDKIDKIDYTISSEFENVEDGS
EILVVGKIEDASTKITKTGKKMAIINILDIHGNMEATAFDEYKKIESMSQDELDEPHAFK
IILNKDAQQFKLKINDIISLDDALYKRFTLKSSKLTDDEVFKFQDYFDTIKHSTIKDIPN
LTKESEILIIGKMSQINTRTTKSGMEMAILNIVDISGNSEMIAFDSTSKFIANMSEDEQD
KIYAFKVAPNKDAQSKPIINQIISLDDAKNGNYTLKTNRRRYEPRVNEQSTPATITGKLE
VDIDIISLDKQKINYIYQLAHSYHQKNGNKRLVLRITNNYDKEVMIFSTEFIVSDEFKSE
LDTILNEAKAG
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttcacacatttacatttacataccgaatattcattgttagacggtgcaaac
aagataaaagttttagccaaaagattaaaagagctaaatataaaatcatgcgctataacc
gatcacggaaatatgtatggggcgcttgatttttataaaactatgaaggctgaaggtata
aaacctatcataggacttgaagcttatatacataatcatgaagatataagcaacaaagag
agtaggcagagatttcatctttgtttatttgctaaaaatgagataggatatcagaatctt
atgtatcttagctcgatgtcatatataaaaggatattactactatccaagaatcaataaa
aaacttttaagagaacatagagaaggtctagtatgtagctccgcatgccttgctggagag
gtaaatttccatttaaatttaagtgatagaaatttaaaaagaggggctggtggatatgaa
tctgccaaaagagtagctttggagtataaagatatattcggcgatgatttttatcttgag
attatgagacacggtataggtgatcaacaacgaatagatgatgatataatcaggctttct
atggaaactggtataaagctgatagctacaaacgatgcccactatactacaaaagatagc
gcagtagctcaaaagatatttgtatatatctcagcaaataaaaacttcgatgataaagta
cgagagcaagttttaagcgagttttatgctaaatctgctgatgagatgagtgctattttt
gctgatatgccagaagttatagaaaatacaaacgagatagtagaaaagtgcaatttagaa
ataaaactaggagacgcaactccgccgaattttaaatttactcaagaatatgcaaaagag
cgtggtataactctacctaatccgcaaaatgaatatgatttgcaaaatgatagttttttg
tttgagtatgagtgcagacaagggcttgaaaaaagacttgagtttatcgatccttcaaaa
catcaaatgtataaagataggctagatcttgagataaatactataaataatatgaaattt
ccgggctatatgcttatagtggccgactttataaacgaggcgaaaaatcgtgggatacca
gtaggtcctggacgtggaagtgcggctggaagcctcgtggcttacgctcttcgcattact
gatatcgatcctttgccttacaacttactatttgagagatttttaaatccagagcgtata
agtatgccagatatcgatgtggatttttgtcaaaatagacgtggggaagttattgattat
gttatagaaaagtatggagaatacaacgttgctcaagtagcaacttttggtaagcttttg
gcaaaaggtgttataagagatgttgcaagagttatgggtatgccgtactctgaagcagat
gctatggcaaaacttataccagacgagcttggtatcacgctaaaagcgcataaaaataaa
aaaggcgatatggaagatggcgcatttgaaaaagagccgaaaattggtgagcttatagca
aaaaacgacttagcaaagcaagtttgggaatactcttgtgagcttgaaggattaaataga
aatcctggaatgcacgctgcaggtattgttataagcaatgaggagttatggaaaaaggct
cctttgtggaaacaaagcaatgctgaagccggtcactacgtaactcaatacacaaaagat
tatcttgaggatgttgatcttatcaaatttgactttttggggcttaaaactttaaccgta
attgataatgcaaaaaagctaattaaagagcgttttggagtagatattttatgggaaaaa
atagattttaacgatcaaaaaacttatgaaactattcaaagcggaaatacacttggtata
tttcagatagagtcaagcggtatgcaatcccttgctgcgaagcttagaccagactgcttt
gaagatatcatagctatgatagcgctttatcgtcctggacctttgaattcaggaatggtt
gatgactttatagatattaaacatggtaaaaaaaagatagaatacgctttttctgcttta
aagcctatacttgagccgacgtacggagttatagtttatcaagagcaagttatgcaagtt
gttcaaacagtcggaggatttagtcttggaggtgcggatcttgtaaggcgcgctatgagc
aagaaaaaagaagatgagatgttgcatcttaaaactcagtatttagaaggtgcgaaaaaa
aatggttttgatgaaggtaaagcagacgcgctttttgagcttattatgaaatttgctgag
tatggatttaacaaatcccactcagcggcgtatgcgcttataacttttcaaacagcgtat
ttaaaaacgtattatccggcggaatttatggctgctttgcttactagcgaagagaataat
atagataaaattataaaatatatcgatgagatcaaaagacttaatataaagctacttcct
ccaaatgtaaattactcagtaagagagtttagcgttatacaaaaagatggaagcgactcc
attatctacggtatggcggcgataaaaggcgttggtgtaggagctgtggaagatatcata
aaagctagagaagagggaccttttgaaagtgttgatagctttatatcaaaaacagattgt
acaaccgtaaatagacgtgtttttgagtctcttataaaatctggcgcatttgatgacttt
ggctttactagaaagatgctgatacacaacctagaaaccatcatagaaaactcaaaacgt
atatcagatatcaaaaaaaatgctacaaattctctatttagcgatgatgatagtatgaat
gagataagcgttgatcttgttaatatcaaagacgaatttgataaaaaagagatacttaaa
tttgagcaagagatacttggagtttatgtttcaggtcatccattagacgagtatagagat
aaaatagataagatagactacaccatatcaagcgaatttgaaaatgtggaagacggaagc
gagatattagtagtaggtaagatagaagatgcaagcacaaagataacaaaaactggtaag
aaaatggctatcataaatatccttgatatccatggaaatatggaagctacggcatttgat
gagtataaaaaaatagaatctatgagccaagatgagcttgatgagccacatgcgtttaaa
attattttaaataaagacgctcagcaattcaagctaaaaataaatgatataataagcctt
gatgatgccttatacaagagatttacacttaaatcaagcaagcttactgatgatgaggta
tttaaatttcaagattattttgatactatcaagcactctacaataaaagatattccaaac
ttaaccaaagaaagtgaaatacttatcataggaaaaatgagtcagataaacacaagaact
actaaaagcggtatggaaatggctatattaaatatagttgatataagtggcaattctgaa
atgatagcttttgattctactagtaaatttatagcaaatatgagcgaagacgagcaagat
aaaatatacgcttttaaagtcgctccaaacaaagatgctcagtcaaaacctataataaat
cagataattagtcttgatgatgcaaaaaatggaaattacactcttaaaacaaatagaaga
cgatatgagcctagggtcaatgagcaaagcactcctgctacaataacaggaaaacttgaa
gttgatatagatatcatcagtttagataagcaaaagataaattatatctatcagcttgct
cactcttatcatcaaaaaaatggaaataaaagattagttcttagaataactaataattat
gataaagaagtgatgatttttagcactgaatttatcgttagtgatgagtttaaatcagag
ttagataccatattaaacgaagctaaggcaggctaa
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