Campylobacter fetus subsp. testudinum 03-427: CFT03427_1280
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Entry
CFT03427_1280 CDS
T02899
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
camp
Campylobacter fetus subsp. testudinum 03-427
Pathway
camp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
camp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CFT03427_1280 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
camp03021
]
CFT03427_1280 (rpoC)
03400 DNA repair and recombination proteins [BR:
camp03400
]
CFT03427_1280 (rpoC)
Enzymes [BR:
camp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CFT03427_1280 (rpoC)
Transcription machinery [BR:
camp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CFT03427_1280 (rpoC)
DNA repair and recombination proteins [BR:
camp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CFT03427_1280 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
DUF6675
Motif
Other DBs
NCBI-ProteinID:
AGZ82133
LinkDB
All DBs
Position
complement(1308424..1312950)
Genome browser
AA seq
1508 aa
AA seq
DB search
MSELKPIEIKEDAKPRDFEAFQLRLASPDRIKAWSHGEVKKPETINYRTLKPERDGLFCA
KIFGPIRDYECLCGKYKKMRYKGIKCEKCGVEVTTSKVRRSRMGHIELVTPVAHIWYVNS
LPSRIGTLLGIKMKDLERVLYYEAYIVENPGDAFYDNENSKKVELYDVLNEEQYVLLEQK
FSESGFKARMGGEVIRDLLASLDLVSILEQLKIEIESTNSEAKKKTIVKRLKVVESFLNS
GNRPEWMMITNLPVLPPDLRPLVSLDGGKFAVSDVNDLYRRVINRNTRLKRLMELDAPEI
IIRNEKRMLQEAVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFS
GRSVIVVGPKLRMDQCGLPKKMALELFKPHLLARLEEKGYATTVKQAKKMIEDKTNEVWE
CLEEVVADHPVMLNRAPTLHKMSIQAFHPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHV
PLSQEAIAECKILMLSSMNILLPASGKAVTVPSQDMVLGIYYLSLERDKAVGANKIFASV
DEVMIAVEAHYLDLHAKIKTMVEGRTVFTTAGRLIIKSILPNLKENSVPESMWNKVMKKK
DIANLVDYVYKNGGLEVTAGFLDKLKNLGFRYATKAGISISIADIIIPESKYSYVDEAKK
RVREIQNQYGSGLLTDSERYNKIVDIWTDTNNKVAAEMMKLIKTDKSGFNSIYMMADSGA
RGSAAQIRQLAGMRGLMAKPDGSIIETPITSNFREGLNVLEYFISTHGARKGLADTALKT
ANAGYLTRKLIDVAQNVKVTMDDCGTHEGVEITEITENGELIESLEERVLGRVLSDDVID
PITNEILFTEGTLVDEVKARTITDAGIKSVSIRTPITCKASKGVCSKCYGINLGEGKLVK
PGEAVGIISAQSIGEPGTQLTLRTFHIGGTASTEQQDRQVVAQKEGFIRYYNLKTYENNG
KFIVTNRRNAAILLVEPKIKAPFDGEINIEMAHEDINVTIKGKSDEVKYVLRKHDLAKPN
ELAGVSGKVEGKFYIPYIKGDKVKENESIVEVIKEGWNVPNRIPFASEVKVADGDPVTQD
ILSGANGVLKFYILKGDYLERIKNVKKGNMVSEKGLFVVIADDDDREAVRHYIPRNSVIK
FNDSDIVSAKDIIAKPQDGSKLVIAEWDPYSTPVIAEEAGIVAYEDIEPGYSVAEQYDEA
TGESRLVINEYLPSGVKPTIVISTKSGKLIRYQLEPKTAIFVKDGAEVCRADTIAKTPKA
VAKSKDITGGLPRVSELFEARRPKNTAIIAEIDGTIKFDKPLRSKERIVIMAEDGSSTEY
LIDKSRQIQVRDGEFVHAGEKLTDGLVSSHDVLRILGEKALHYYLISEIQQVYRSQGVAI
SDKHIEIIVSQMLRQVKIVDSGHTNFIIGDMVSRRKFREENDRIMKIGGEPAIAEPVLLG
VTRAAIGSDSVISAASFQETTKVLTEASIAAKFDYLEDLKENVILGRMIPVGTGLYQDKK
VKIKTNED
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagttaaaacctattgagataaaagaagatgcaaaaccaagggattttgaagct
tttcaattaagacttgcaagtccagatcgtataaaagcgtggagtcacggtgaagttaaa
aagcctgaaaccattaattatcgtacgttaaagccagaacgagatggtctattttgcgct
aagatatttggacctattagagattatgaatgtctatgtggtaagtataaaaagatgcgt
tataaaggaattaaatgtgaaaagtgcggcgttgaagtaactacttcaaaggttcgtcgc
tcacgtatgggacacattgagcttgttactcctgtagcgcatatttggtatgtaaattcg
cttcctagtcgtataggtactttgcttggcataaaaatgaaagatttggagcgtgttctt
tactatgaagcttatatagtagaaaatccgggcgatgcgttttatgacaatgaaaatagc
aaaaaagtagagctttatgatgttttaaacgaagagcagtatgtattgcttgagcaaaaa
tttagcgaaagtggctttaaagctagaatgggcggcgaagtaatacgtgatctacttgca
agcttggatcttgtctctatacttgaacagctaaaaatcgagatagaaagtacaaatagt
gaagcaaagaaaaaaactatagtaaagcgtttaaaagtcgtcgagagttttttaaattca
ggtaaccgtccagaatggatgatgataacaaatttacctgttttaccgcctgatttaaga
cctcttgttagtcttgatggtggtaagtttgcagtttctgatgtgaatgatctatatcgt
agagttataaatagaaatactcgtttaaaaagacttatggaacttgacgctccagaaatt
attattcgtaacgaaaaaagaatgcttcaagaagcagttgatgctctgtttgataatggc
agacgtgcaaatgcggtaaagggtgcaaacaaaagaccgttaaaatctctaagcgaaatc
ataaaaggaaagcaaggacgtttccgtcaaaacttgcttggtaagcgtgtggatttctca
gggcgttcagttatagtcgtaggaccaaagcttagaatggatcaatgcggtcttcctaaa
aaaatggcgcttgagctatttaaaccgcatcttttggctcgccttgaagaaaaaggctat
gctactaccgttaagcaagccaaaaagatgatagaagataaaacaaatgaagtttgggag
tgccttgaagaggtagttgcagatcatcctgttatgttaaatcgtgctcctacactgcat
aaaatgtctatccaagcgtttcaccctgttctaatagaaggtaaggctatccagcttcat
cctcttgtttgctcggcgttcaacgcagactttgatggtgaccaaatggctgtgcatgta
ccgctttctcaagaggctattgcagagtgtaaaattcttatgttaagttcgatgaatatc
ttacttcctgcaagcggaaaagcagtaaccgttcctagccaagatatggttttgggaatt
tattacttaagtcttgaaagagataaagctgttggggctaataaaatttttgctagcgtt
gatgaggtaatgatagctgttgaggctcactatcttgatttgcacgcaaagataaaaact
atggttgaaggtcgcactgtatttacaactgcaggacgtcttatcataaaatcaatatta
ccaaatttaaaagaaaactctgttccagaatctatgtggaataaagttatgaagaaaaaa
gatattgcaaatttggttgattatgtttataaaaatggcggtcttgaggtaacggcagga
tttttagataagcttaaaaatctaggatttagatacgctaccaaagcaggaataagtata
tctatagctgatattatcatacctgagagtaaatatagttatgtagatgaagcaaagaaa
agagttagagaaattcaaaaccaatacggctcaggtttgctaaccgactcagaaagatac
aataaaattgttgatatctggacggatacaaacaacaaagttgcagctgaaatgatgaag
cttatcaaaacagataaaagtggatttaactctatttatatgatggcagactcaggagca
agaggtagcgcggctcaaattcgtcagcttgctggtatgcgtggtcttatggcaaaacct
gatggttcgattatcgagactcctattacgtcaaatttccgtgagggtttaaatgtgctt
gagtatttcatctcaactcacggcgctagaaaaggtcttgcagataccgcgcttaaaact
gcaaatgccggatatcttacaagaaagcttatcgatgttgctcaaaacgtaaaagttact
atggatgattgcggtactcacgaaggtgttgagataacagagattacggaaaatggagag
cttattgaaagcttagaagaaagagtgttaggtagagttttaagcgatgacgtaatcgat
cctattacaaacgagattttatttactgaaggtactcttgtagatgaagtaaaagctaga
actatcactgacgctggtataaaatcagtaagcataagaactcctataacttgtaaagca
agtaaaggtgtatgttcaaaatgttatggtataaatcttggcgagggtaaattagtaaaa
ccaggcgaagcagtcggtatcatttcagctcaatcaatcggcgaaccaggtactcagctt
actctaagaacattccacatcggtggtactgcttctacagagcagcaagatcgtcaagta
gttgctcaaaaagagggatttatcagatattataatcttaaaacatatgagaataatggt
aaatttatagtaacaaatcgtcgtaatgcagctatattgttagttgagccgaagataaaa
gctccgtttgatggagagataaatatagaaatggcacacgaagatataaatgttactata
aaaggtaaaagcgatgaggttaaatatgttttaagaaaacacgatttagccaaaccaaat
gagcttgctggagtaagtggtaaagttgaaggtaagttctatataccttatataaaaggt
gataaagttaaggaaaacgagagtatagtcgaggttataaaagagggttggaacgtgcca
aatcgtattccttttgctagtgaagtaaaagtagccgacggtgatcctgttactcaagat
atattatctggagcaaatggtgtgcttaagttttatatcttaaaaggcgactatctagag
agaattaaaaatgttaaaaaaggcaatatggttagcgaaaaaggactatttgttgttatc
gccgatgatgacgatagagaagctgttcgccactatataccaagaaatagcgttattaaa
tttaatgatagtgatatagtaagcgcaaaagatattatagcaaaaccgcaagatggcagc
aaacttgtaattgccgagtgggatccatactcaactcctgttatagcagaagaagctggt
atagttgcttatgaagatatagaacctggatacagcgtagctgagcagtacgatgaagct
acaggagagagcaggcttgttataaatgagtatttaccgagcggagttaagcctaccata
gttatatcgactaaaagtggaaagcttattcgctatcagttagagcctaaaactgctata
tttgtaaaagatggagcagaagtttgtagagccgatactatagctaaaactccaaaagcg
gttgcaaaatcaaaagatatcaccggaggtcttcctagagtttctgagttgtttgaagca
agacgtcctaaaaatacggctatcatcgcagagattgatggtactatcaaatttgataaa
cctcttcgctcaaaagaacgtatagtgataatggctgaagatggctcaagcacagagtat
cttatagataaatctcgccaaattcaagtaagagatggcgagtttgtgcatgctggagag
aaattaaccgatggtttggttagtagccacgatgtattaagaatattaggtgaaaaagca
ttgcattattacttgataagcgaaattcaacaagtttatcgctcacaaggcgttgctata
agtgataaacatatagagattattgtatctcaaatgttgcgtcaagtaaaaatagtagat
agcggtcatacaaactttatcataggtgatatggtaagtaggcgtaaatttagagaagag
aatgaccgtataatgaaaataggtggcgaaccagcaattgccgagcctgtacttcttggt
gttacaagagctgcgataggaagcgatagcgttatctcagcagcttctttccaagagact
acaaaggttttaacagaagcaagtatcgctgctaaatttgactacctagaagatctaaaa
gagaacgtcattttaggtcgtatgataccagttggtactggtctttatcaagataaaaaa
gttaagattaaaacaaacgaagattaa
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integrated database retrieval system
