Campylobacter fetus subsp. testudinum 03-427: CFT03427_1385
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Entry
CFT03427_1385 CDS
T02899
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
camp
Campylobacter fetus subsp. testudinum 03-427
Pathway
camp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
camp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFT03427_1385 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
camp03021
]
CFT03427_1385 (rho)
03019 Messenger RNA biogenesis [BR:
camp03019
]
CFT03427_1385 (rho)
Transcription machinery [BR:
camp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CFT03427_1385 (rho)
Messenger RNA biogenesis [BR:
camp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CFT03427_1385 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
ATPase_2
AAA_25
AAA_22
Spore_III_AA
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
AGZ82231
LinkDB
All DBs
Position
1409874..1411208
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AA seq
444 aa
AA seq
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MENKDNAQSHQSSSGAKKQHTRTHIPVDGYKIEELRQLDLDSLVAIANEVGVENPREFRR
QELVFEILKAQTKQGGFILFTGILEIVGDGYGFLRATDANLSDSANDTYVSQSQIKKFAL
RVGDIITGQVREPREQEKYYALLKIEAINYKSIAEAKERPLFDNLTPLFPNEKIKLEYDP
MKLTGRVLDLFTPIGKGQRGLIVAPPRTGKTELMKELAHGITKNHPEMELIVLLIDERPE
EVTDMQRSVKGEVFSSTFDLPAINHVRVAELVIEKAKRSVEMGKDVVILLDSITRLARAY
NTVTPSSGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIVATALIDTGSRMDDVIFEE
FKGTGNSEIVLDRTISDRRIYPAVNILKSGTRKDELLQGPDDLGKIWAIRNIIATMDDIE
ALKFLYSKMLKTKDNKELLGIMNE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaagacaatgcccaatcccaccaaagttcttcaggtgcaaaaaaacagcac
actcggacgcatattccagttgatggatataaaatcgaagaattaagacaactcgatctt
gatagcttagtagccatagcaaacgaagtcggagttgaaaatccacgagaattcagacgc
caagagcttgtttttgaaattttaaaagctcaaacaaagcaaggcggttttatattattt
acaggaattttagaaatagtaggtgatggatacggctttttaagagctactgatgcaaat
ttaagcgattcggcaaatgatacctatgtaagtcaaagtcaaattaaaaaattcgctctt
cgtgtcggtgatatcatcactggacaagtaagagagccaagagagcaagagaaatactac
gctttactaaaaatagaagctataaattacaaatccatagcagaagcaaaagaaagaccg
ctttttgacaacctaactccgctttttccaaatgaaaaaataaaactcgaatatgacccg
atgaaactaacagggcgtgttttggatctatttactcctattggaaaaggtcaaagaggt
cttatagtggctcctccaagaacaggtaaaacagagcttatgaaagagcttgctcacggt
ataacaaaaaatcacccagagatggaactcatagttcttcttatagatgagcgtcctgaa
gaggttacagatatgcaacgctcagtaaaaggagaggtttttagctctacttttgatctt
cctgcgataaatcacgtaagagttgctgagctagtcatagaaaaagcgaaacgttcagta
gaaatgggaaaagacgttgttatacttcttgatagcataactcgccttgcacgtgcttat
aacacagtcactcctagcagcggaaaagtactaagcggaggagtagatgcaaacgcacta
cataaaccaaaaagattttttggagcagcaagaaatatagaaaacggtggaagcctaacc
atagtcgcaacagctctgatagatactggatcacgtatggatgatgtgatatttgaagag
tttaagggtactggaaatagcgagatcgtacttgatagaactatcagtgatagaagaatt
tatccagctgtaaatatactgaaatctggaacaagaaaagatgaacttcttcaaggacca
gatgatcttggtaaaatatgggcgataaggaatattatagcaacgatggacgatatcgaa
gcgcttaaatttttatattcaaaaatgttaaaaacgaaagataataaagaacttcttggc
ataatgaacgaatag
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