Campylobacter sp. RM16704: CAQ16704_0393
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Entry
CAQ16704_0393 CDS
T03560
Symbol
addB
Name
(GenBank) AddAB recombination complex, helicase AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
camr
Campylobacter sp. RM16704
Brite
KEGG Orthology (KO) [BR:
camr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
camr03400
]
CAQ16704_0393 (addB)
Enzymes [BR:
camr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CAQ16704_0393 (addB)
DNA repair and recombination proteins [BR:
camr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CAQ16704_0393 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_1
Vac14_Fab1_bd
MutS_V
Motif
Other DBs
NCBI-ProteinID:
AJC85898
LinkDB
All DBs
Position
364126..366513
Genome browser
AA seq
795 aa
AA seq
DB search
MKLFVFSSLRALRKYYEKKLQVDTLVDSAMSIAEFIQKIVFSKYFQATHYECLLLMKKAC
EQTKNLELSLKIPSNFFAFLKNNAYLFSFFKELSLEKKDINSLKFYDAYAQYDEHLQILE
ELFKNYLTLLKEQNLYDDISLPLDYEINTDFLKNYDEIIFDFQGFLNAFEVELLLKVKEV
LPFKVQFNCTKFNKDFLNTLSFLQGFSLKENHTYLFDLNQKVILKEESFFKECKISYKSF
HLRSLQAAFVFEKINSFLKAGVCAKDIVVITPDENFVDILRLYDKNNVLNYASGESIKNT
LFYHRLKSLYESAKDDEFEYEENEEFYERYNLNKHLCNLHFFPSNIDFMEFKKLFDKNIT
FDFFENFILALMEDSSEELKNYIYQELLFIKELIKTHELSFVQILELFFMQIDSIRLSNV
GGGEVTVMGLLESRGLSFDGVIIVDFNDEFIPKRVSSELFLNNEIRKKSGLITHAQRENL
QRHYYYMLIAKAKLVGISYVENEERIKSRFLSELDFPLSEDKIYSNKAYVKYFQTYTCTF
NLEPITSIKAKHDYFQDDLSFSRLHQLINYGLDYYYKYVLGLKEPKVLDDNLRANELGSF
IHKALEEYYNQNKKLRYFDYEKFIDIVKNLKDYKIDALNLASIQVMFKEFQILENEHFNQ
GYMVEKCEFLQKKEFTTENGVKIIAFGRLDRIDNNNYERLIIDYKTGKVDEKSYQLAFYR
FLLEENHTLANIKTCFYDLKNMKIIYEDAKSKSVQELKKLLNELSKEPLEKEFSNQKNDN
TYSPYTMLYKKEFKL
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaactttttgtttttagctcattaagagctttaagaaaatattatgagaaaaaatta
caagtagatactttggtagattcagctatgagtatagctgaattcatacaaaagatagta
ttttctaaatattttcaagcaacacattatgaatgtttgcttttgatgaaaaaagcttgt
gagcaaactaaaaatttagaactaagcttaaaaataccaagtaatttttttgcgttttta
aaaaataatgcttatttgtttagtttttttaaagagttaagtttagaaaaaaaagatatt
aattcattaaaattttacgatgcatatgcacaatatgatgaacatttacaaattttagaa
gaactttttaaaaactatcttaccctattaaaagagcaaaatttatatgatgatatttct
ttgccgttagattatgaaatcaatactgattttttaaaaaattatgatgagattattttt
gattttcaaggttttttaaatgcttttgaagtggagcttttgttaaaagttaaggaagtg
cttccttttaaagtgcagtttaattgcactaaatttaacaaagattttttgaatactctt
agttttttgcaaggattttctcttaaagaaaatcatacctatttgtttgatttaaatcaa
aaagtaattttaaaagaagagagtttttttaaagaatgcaaaattagctataaaagtttt
catctaagatctttacaagctgcttttgtttttgaaaaaatcaattcttttttaaaagca
ggtgtttgtgcaaaagatattgtagtgattactcctgatgagaatttcgtagatatttta
agactttatgataaaaacaatgttttaaactatgcaagtggagaaagtatcaaaaacaca
cttttttatcacagattaaagtctttgtatgaaagtgctaaagatgatgagtttgaatat
gaagaaaatgaagagttttatgaaaggtataatttaaacaagcatttatgtaatttacat
ttttttccttctaatattgattttatggaatttaaaaagctttttgataaaaatattact
tttgatttttttgaaaattttattttagctttgatggaagatagtagtgaagagcttaaa
aattatatttatcaagagcttctttttattaaagaacttataaaaactcatgaattaagt
tttgtacaaattttagaattattttttatgcaaattgatagcataagattaagcaatgtt
ggcggtggagaagttaccgtaatggggcttttagaaagcagggggcttagttttgatggg
gtaattatagtggattttaatgatgaatttatcccaaaaagggtttctagtgagttattt
ttaaataatgaaattcgtaaaaaatcaggacttattactcatgcacaaagagaaaatttg
caaagacattattattatatgttaatagctaaggcaaaattagttggaatttcttatgtt
gaaaatgaagaaagaattaagtcaagatttttaagtgagcttgattttccacttagtgaa
gataaaatttatagtaataaagcttatgtaaaatactttcaaacttacacatgtactttt
aatcttgagcctattacaagtattaaagcaaagcatgattattttcaagatgatctttct
ttttcaagacttcatcaattgattaattatggtttggattattattataaatatgtttta
ggattaaaagaaccaaaagttttagatgataatcttagggcaaatgaactaggaagtttt
attcataaagctttagaagaatactataatcaaaataaaaaattaagatattttgactat
gaaaaatttatagatatagttaagaatttaaaagactataaaattgatgctttgaattta
gcttcaatacaagtaatgtttaaagaatttcaaatccttgaaaatgaacattttaatcaa
ggttatatggtagaaaaatgtgaatttttgcaaaaaaaagaatttactacagaaaatgga
gtaaaaataatcgcttttgggcgtttagatagaatagataataataactatgaaagattg
attatagattataaaacgggcaaggtagatgaaaaatcttatcaactagctttttataga
tttttgttagaagaaaatcatacattagcaaatataaaaacttgtttttatgatttaaaa
aatatgaaaattatatatgaagatgctaaaagtaaaagtgtacaagagttaaaaaaattg
ctaaatgaactttccaaagagcccttagaaaaagaattttctaatcaaaaaaacgacaat
acttatagtccttataccatgctttataaaaaggagtttaagctttga
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