Campylobacter sp. RM16704: CAQ16704_0421
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Entry
CAQ16704_0421 CDS
T03560
Symbol
truD
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
camr
Campylobacter sp. RM16704
Brite
KEGG Orthology (KO) [BR:
camr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
camr03016
]
CAQ16704_0421 (truD)
Enzymes [BR:
camr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CAQ16704_0421 (truD)
Transfer RNA biogenesis [BR:
camr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CAQ16704_0421 (truD)
Prokaryotic type
CAQ16704_0421 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF2732
Motif
Other DBs
NCBI-ProteinID:
AJC85926
UniProt:
A0A0A8GVX9
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All DBs
Position
393133..394251
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AA seq
372 aa
AA seq
DB search
MEENIIFKPLYTLKHSPINVYFSKNSNDFVVREKPLYEFSGKGEHLILHIQKKDLSTSEA
LRILSEHSGIKMRDFGYSGLKDKQGLTFQYISMPKKFEESLKIFKHDKMKIIETFYHNNK
LRIGHLKGNLFFIRLKKVSKVDALKIEQAFKNIKEQGYANYFGYQRFGKFQDNFLQGLEI
LKGKKIKNKKMQEFLISAFQSELFNRYLSKRVELSHFINDFNEKELKQIYGLEKDEIKSL
KNQKQFFKLLKGEVLGHYPFGKCFICEDLPSEVERFNQKDISAMGLLIGSKAFEVNEGLA
KKMEDEIFSIAYEFKDKMQGSRRFMWSYLQDCKSHYDEEKAHFTLEFFLQKGSYATVVLE
EILHKDILEQNL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaacatcatttttaaacccttatatactttaaagcatagcccaataaatgta
tatttttctaaaaatagtaatgattttgtggttagagaaaaacctttgtacgaatttagt
ggcaagggtgagcatcttattttacatatacaaaaaaaagatcttagtactagtgaagct
ttgagaattttaagtgagcatagtggtattaaaatgagagattttggctatagtggttta
aaagataagcaaggtttaacatttcagtatatttccatgcctaaaaaatttgaagaaagt
ttaaaaattttcaaacatgataagatgaaaattatagaaactttttatcataataataaa
cttagaataggacatttaaaaggaaatttgttttttataagattaaaaaaagtttctaag
gtagatgctttaaaaatagaacaagcttttaaaaatattaaagagcaaggatatgctaat
tattttggatatcaacgttttggcaaatttcaagataattttttacaaggattagaaatt
ttaaaaggtaaaaaaatcaaaaacaaaaaaatgcaagaatttttaatttctgcatttcaa
agtgagctttttaatagatatttaagcaaaagagtcgagttgtctcattttattaatgat
tttaatgagaaagaattaaagcaaatttatggtttagaaaaagatgagattaaaagctta
aaaaaccaaaagcaattttttaagcttttaaaaggtgaagtcttagggcattatcctttt
ggaaaatgttttatatgtgaagatttaccaagtgaagtggaaagatttaatcaaaaagat
attagtgctatgggtcttttgataggttctaaagcttttgaagtaaatgaaggtttagct
aaaaaaatggaagatgagattttttctattgcatatgaatttaaagataaaatgcaaggt
tcaagacgttttatgtggtcttatttgcaagattgcaaaagtcattatgatgaagaaaaa
gcccattttactttggaatttttcttgcaaaaaggttcgtatgcgacagttgtattagag
gaaattttacacaaagacattcttgagcaaaatttataa
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