Campylobacter sp. RM16704: CAQ16704_0492
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Entry
CAQ16704_0492 CDS
T03560
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
camr
Campylobacter sp. RM16704
Pathway
camr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
camr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAQ16704_0492 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
camr03021
]
CAQ16704_0492 (rho)
03019 Messenger RNA biogenesis [BR:
camr03019
]
CAQ16704_0492 (rho)
Transcription machinery [BR:
camr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CAQ16704_0492 (rho)
Messenger RNA biogenesis [BR:
camr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CAQ16704_0492 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
Mor
Spore_III_AA
ATPase_2
AAA
OB_RNB
AAA_22
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AJC85986
LinkDB
All DBs
Position
complement(466785..468083)
Genome browser
AA seq
432 aa
AA seq
DB search
MEKEKKQHQRTHIPVEGYKIEDLKLLDLESLIKIANEAEIENPREFRRQDLIFEILKAQT
KKGGFILFTGILEISPEGYGFLRGMDSNLSDSVNDAYVSNSQIRKFALRVGDIVTGQVRE
PKDQEKYYALLKIEAINYLPLKEARERPLFDNLTPIFPTEKIKLEYDPLKLTGRMLDLFA
PIGKGQRSLIVAPPRTGKTELMKELATAIAKNHPEAHLIVLLVDERPEEVTDMQRCVKGE
VFSSTFDLPAYNHVRVAELVIEKAKRMVETGKDVVILLDSITRLARAYNTATPSSGKVLS
GGVDANALHKPKRFFGAARNIEHGGSLTIIATALIETGSRMDEVIFEEFKGTGNSEIVLD
RNISDRRIYPAINIIKSGTRKEELLQGVEKLQKIWAIRSAISQMDDIEALKFLYSKMLKT
KSNDELLSIMNE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaaaaaaaacaacatcaaagaacacacattcctgtagaaggttacaagatt
gaagacttaaagttgcttgatttagaaagcttaataaaaatagctaatgaagctgagata
gaaaacccaagagaatttagaagacaagaccttatttttgagattctaaaagcacaaact
aaaaaaggtggttttatactctttacgggaattttagaaatttctcccgaaggttatggt
ttcttgcgtggaatggattcaaatttaagtgatagtgtaaatgatgcttatgtatcaaac
tcacaaattcgtaaatttgctcttcgtgttggagatatagtaacaggacaagttagagaa
cccaaagatcaagaaaaatactatgctttattaaaaatagaagcgattaattatcttccg
ttaaaagaagctagagaaagacctttatttgataatcttactccaatcttcccaactgaa
aaaatcaaattagaatacgatcctttaaaactaacaggtagaatgcttgatctttttgcg
cctattggaaaaggccaaagaagtctaattgtagcacctccaagaacaggtaaaactgaa
cttatgaaagaattagctactgctattgcaaaaaatcacccagaagctcatttgattgtt
ttattagttgatgagcgtccagaagaagttactgatatgcaaagatgcgttaaaggggag
gtatttagctctacctttgatctacctgcttataaccatgttagagtagctgaacttgtt
atagaaaaagcaaaaagaatggttgagacaggtaaagatgtggttattttacttgattct
atcacaagattagcaagagcttataatactgctacaccaagtagtggaaaagttttaagc
ggtggggttgatgcaaatgctcttcataagccaaaaagattttttggagctgctagaaat
atagagcatggtggctcattaaccattatagcaactgctctaattgaaacaggttcaaga
atggatgaagttatttttgaagaatttaaaggcacaggaaatagcgaaattgttcttgat
agaaatatttcagatagaagaatttatcctgcaatcaacatcataaaatcaggcacaaga
aaagaagaattactccaaggagttgaaaaacttcaaaaaatttgggcaattagatcggct
atttcgcaaatggatgacatagaagctttaaaatttttatactctaaaatgctaaaaacc
aaaagcaatgatgaattgctatctattatgaatgagtag
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