Campylobacter sp. RM16704: CAQ16704_0873
Help
Entry
CAQ16704_0873 CDS
T03560
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
camr
Campylobacter sp. RM16704
Pathway
camr03030
DNA replication
camr03430
Mismatch repair
camr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
camr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CAQ16704_0873 (dnaE)
03430 Mismatch repair
CAQ16704_0873 (dnaE)
03440 Homologous recombination
CAQ16704_0873 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
camr03032
]
CAQ16704_0873 (dnaE)
03400 DNA repair and recombination proteins [BR:
camr03400
]
CAQ16704_0873 (dnaE)
Enzymes [BR:
camr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CAQ16704_0873 (dnaE)
DNA replication proteins [BR:
camr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CAQ16704_0873 (dnaE)
DNA repair and recombination proteins [BR:
camr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CAQ16704_0873 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
CERK_C
Motif
Other DBs
NCBI-ProteinID:
AJC86330
LinkDB
All DBs
Position
complement(842513..846103)
Genome browser
AA seq
1196 aa
AA seq
DB search
MSQFTHLHLHTEYSLLDGANKLKELAKTLKAQGATSVAMTDHGNMFGAIDFYKTMKAEGI
KPIIGLEAYLHNHDDLSDKSSRQRFHLCLFAKNEIGYKNLMYLSSQSYIHGLYYYPRINK
KILETHSEGLICSSACLQGEINWHLNTKNERNLKFGAKGYEGAKEAALWYKKVFGDDFYL
EIMRHGIDDQKFIDDSIIKLAKELDIKIIATNDTHYTFKERAAAHEVFMCIAMGVKLDDP
GRLRHEVHEFYVKTPEQMGELFADIPEAIENTQEIANKCNLELKLGDPTPPNFKFTKEYA
NKYNLNLVEDKEFSFDNDDIVFEYLCKKGLEERLQFIDKSKHQEYKDRLDLEIDIIKNMK
FSGYMLIVHDFIAAAKEKDIPVGPGRGSAAGSLVSYCLKITDLDPIPYNLLFERFLNPER
VSMPDIDVDFCQDRRGEVIDYVIDKYGAEKVAQVITFGKLLAKGVIRDVARVCDMSIPDA
DALAKLVPEELKITLEKAYEQEPKIAEFINSHPKGRQVWDFAKALEGLNRNAGMHAAGVV
ISNEALWNKAPLFRQSKNDERHLVTQYSKEYLEDVDLIKFDFLGLKTLTVIDNAIKLVKK
RYGKDVIWEKIDMNDPKVYKTIQSGNTLGIFQIESGGMQSLNARLKPERFEDLIAVLALY
RPGPLDSGMVDDFIDIKHGRKAATYAFEDLKPILENTYGVIVYQEQVMQIVQKIGGFSLG
GADNVRRAMGKKKREILDNLKAEYLEGAKKQGYDEKKADDLFELILKFAEYGFNKSHSAA
YALITFQTAYLKTYYPSEFMAALLTSEESNVDKVAKYIEEMKRMNIKLLPPSINKAQREF
SATKLEDGSEAIIYGLGAIKSVGIPAIENIMAIRKEEGFSDFDDFISSIDPTKINKKTIE
NLAKSGAFDEFGYTRKCLVDNLELISETSRKIAEVKRNSTASLFGEEEIAADIKVGLHDS
KIEFEIMEKLGYEKEILGIYVSGHPLDKFASQIEGIEYFKSMDFETLKGEGEILVVGKIE
DFKSMMSKSGKRYAKAVVLDFYSSFDMIVFEAQVEKVEALFKESKDEAFAFLLRYKNNDN
DLSFSLNEIYTIEEAKENELKSFSKRKSFAKKENKEEFTQEPMKFEENIIELDINKLSKD
MVYEIYDLANTRHNPKDFNNKKLVLKVVDMGSCLLYHTNFVLSQEAMDTIAQKCKG
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatttacacatttacatttacatactgaatattctttacttgatggagcaaac
aagcttaaagagcttgctaaaactttaaaagcacaaggtgcaaccagtgttgctatgact
gatcatggaaatatgtttggtgcaattgatttttataaaacaatgaaggctgaagggatt
aagcctattatagggcttgaagcgtatttacataatcacgatgatttaagtgataaaagc
tcaagacagcgttttcatctttgcttatttgctaaaaatgaaattggctataaaaattta
atgtatttaagttctcaaagttatattcatggcttatattattacccaagaatcaacaaa
aagattttagaaacacatagtgaaggtttgatttgttcttctgcttgtttgcaaggtgag
attaattggcatttaaataccaaaaacgagagaaatttaaaatttggtgcaaaaggttat
gaaggtgcaaaagaggctgcactttggtataaaaaggtttttggagatgatttttatctt
gagattatgcgacatggcatcgatgatcaaaaatttattgacgattctatcattaagctc
gccaaagaacttgatataaaaatcattgcaactaatgatacacactatacttttaaagaa
agagcagctgcacatgaagtatttatgtgtatagctatgggagttaagcttgatgatcca
gggcgtttaagacatgaagtgcatgaattttatgtaaaaacgccagagcaaatgggtgag
ctttttgcagatattcctgaagctattgaaaatactcaagaaatagctaacaaatgtaat
ctagaattaaaattaggtgatcctactccaccaaattttaaatttacaaaagaatacgct
aataaatataatttaaatttggtcgaagataaggaatttagttttgacaatgatgatata
gtctttgaatatctttgtaaaaaaggcttagaagaaagacttcaatttatcgataaaagc
aaacatcaagagtataaagatagacttgatttagaaattgatatcataaaaaatatgaaa
ttttcaggttatatgcttattgttcatgattttatcgcagcagctaaagaaaaagacata
ccagttggtccaggtcgtgggagtgcagcaggaagtttggtttcatattgtttaaaaatt
acggatttagatcctataccttataatcttctttttgagagatttttaaatccagagcgt
gtgtcaatgccagatattgacgtggatttttgccaagatagaagaggggaagtgatcgat
tatgttattgataaatatggagctgaaaaagttgcacaagtgattacctttggtaagctt
ttagcaaaaggagtgattcgagatgtagctagggtttgtgatatgagcatacctgatgct
gatgctttggcgaaattagtccctgaagagctaaaaatcactctagaaaaagcttatgag
caagagccaaaaatagctgaatttataaattctcatccaaaagggcgtcaagtttgggat
tttgctaaggcactagagggtttaaatagaaatgcaggtatgcatgcagcaggagttgtg
atatctaatgaagctttgtggaataaagctccactttttcgacaaagtaaaaatgatgag
cgtcatttagtaacgcagtattctaaagaatatcttgaagatgtggatttaatcaaattt
gactttttgggtttaaaaactcttacggtgattgataatgcgattaagctagttaaaaag
cgttatggtaaagatgtaatttgggaaaagattgatatgaatgatcctaaggtttataaa
accatacaaagtggtaataccttgggtatttttcaaatagaatcaggcggtatgcaaagt
ttgaatgctaggttaaaacctgaaagatttgaggatttaattgcagttttagctttatat
agaccaggtccacttgatagcggaatggtggatgattttatcgatattaagcacggtaga
aaggctgctacttatgcatttgaggatttaaaacctatacttgaaaacacttatggggtt
atagtttatcaagaacaagttatgcaaatagtgcaaaaaatcggtggtttttctttgggt
ggtgctgataatgtgcgtcgtgctatgggtaagaaaaaaagagaaattttggataatctt
aaagcagaatatctagaaggcgctaaaaaacaaggctatgatgagaaaaaggctgatgat
ttatttgagcttattttaaaatttgctgaatatggttttaacaaatctcactcagctgct
tacgcacttataacctttcaaacagcgtatttgaagacttattatccaagtgagtttatg
gctgcacttttaacaagcgaagaaagtaatgtagataaagtcgcaaaatacattgaagaa
atgaaaagaatgaatatcaagcttttaccaccaagtattaataaagctcaaagagaattt
agtgcaactaaacttgaagatggttctgaagctattatttatgggcttggagcaattaag
agcgtagggatccctgctatagaaaatatcatggcaattcgtaaagaagagggctttagt
gattttgatgattttataagctcgattgatcctactaaaattaataaaaaaactattgaa
aacctagcaaaatcaggtgcttttgatgaatttggttatactagaaaatgcttagtagat
aatcttgagcttatttcagaaacaagtagaaaaatagccgaagttaaaagaaactccact
gcttctctttttggagaagaagaaatagcagcagatatcaaagtagggcttcatgatagt
aaaatagaatttgaaataatggaaaaactaggctatgaaaaagaaattttaggaatttat
gtatcaggccatcctttagataaatttgcaagtcaaatagaaggtatagagtattttaaa
agtatggattttgaaacactcaaaggcgagggtgaaattttagttgtaggaaagattgaa
gattttaaatcgatgatgagtaaaagcggtaaaagatatgctaaggctgtagttttagac
ttttattcttcttttgatatgatagtctttgaagcccaagtagaaaaggtagaagcactt
tttaaagaaagcaaagatgaagcttttgcctttttattaagatataaaaacaatgataat
gacttaagctttagtttaaatgaaatttataccatagaagaagcaaaagaaaatgagcta
aaatcttttagtaaaagaaaaagctttgcaaaaaaagaaaataaagaagaattcacgcaa
gaacctatgaaatttgaagaaaatatcatagagcttgatattaacaagcttagcaaagat
atggtgtatgaaatttatgatctagctaatacaaggcataatccaaaagattttaataat
aaaaaactcgtattaaaagtagtggatatggggagttgcttactttatcatacgaatttt
gtgctttcacaagaagccatggatacaatagctcaaaaatgtaaaggttaa
DBGET
integrated database retrieval system
