Campylobacter sp. RM16704: CAQ16704_0962
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Entry
CAQ16704_0962 CDS
T03560
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
camr
Campylobacter sp. RM16704
Brite
KEGG Orthology (KO) [BR:
camr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
camr03016
]
CAQ16704_0962 (truA)
Enzymes [BR:
camr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CAQ16704_0962 (truA)
Transfer RNA biogenesis [BR:
camr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CAQ16704_0962 (truA)
Prokaryotic type
CAQ16704_0962 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AJC86419
LinkDB
All DBs
Position
complement(931598..932332)
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AA seq
244 aa
AA seq
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MLLKLTFSYDGSKFNGSATQPHKLSVQDALANALTHLGIYDKPLFASRTDKGVHAFNAVA
CVKSGGHFKDFSYLKNKINHFSHPFIHIKHIEKVNDDFQVRYDVKKRAYRYILSHENYNP
FLASYVYFYPKINTSLAKKIVYLFEGEHDFKFFQKEGSNNKTSIRIIYKTKVYIYKNHTI
FYFEANGFLRSQIRMMMASILKVLEGKLNQNELLEQINAKKAHCRFLAPASGLYLSRISY
CNNA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcttttaaaattaaccttttcttatgatggctctaaatttaatggctcagctacccag
ccacataaacttagtgttcaagatgctttggctaatgctttaacacatttaggaatttat
gataaacctttgtttgcatcaagaactgataaaggtgtacatgcttttaatgcagtagct
tgtgtaaaatcaggaggacattttaaagacttttcatatttaaaaaataaaattaatcac
ttttctcatccttttatacatattaagcatattgaaaaagtaaatgatgattttcaagtg
cgttatgatgtgaaaaaacgggcttatcgttatatattaagtcatgaaaattataatccc
tttttggcttcatatgtgtatttttatccaaaaataaatactagtttagcgaaaaaaata
gtgtatttatttgaaggtgagcatgattttaaattttttcaaaaagaaggctctaataat
aaaacaagtataagaataatatataaaaccaaggtttatatttataaaaatcatactatt
ttttattttgaggctaatggctttttaagatcacaaattagaatgatgatggctagtatt
ttaaaagtattagagggaaaattgaatcaaaacgagcttttagagcaaattaatgctaaa
aaagctcattgtagatttttagctccagctagtggcttgtacttaagcaggatttcttat
tgcaataatgcataa
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