Campylobacter sp. RM16704: CAQ16704_1014
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Entry
CAQ16704_1014 CDS
T03560
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
camr
Campylobacter sp. RM16704
Pathway
camr03030
DNA replication
camr03430
Mismatch repair
camr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
camr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CAQ16704_1014 (dnaQ)
03430 Mismatch repair
CAQ16704_1014 (dnaQ)
03440 Homologous recombination
CAQ16704_1014 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
camr03032
]
CAQ16704_1014 (dnaQ)
03400 DNA repair and recombination proteins [BR:
camr03400
]
CAQ16704_1014 (dnaQ)
Enzymes [BR:
camr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CAQ16704_1014 (dnaQ)
DNA replication proteins [BR:
camr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CAQ16704_1014 (dnaQ)
DNA repair and recombination proteins [BR:
camr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CAQ16704_1014 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
HTH_52
Motif
Other DBs
NCBI-ProteinID:
AJC86469
LinkDB
All DBs
Position
complement(980340..981104)
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AA seq
254 aa
AA seq
DB search
MSQQQIDDLIIKLSKENRPFPWVLKELAKIEELNHYDFDLYIFELLGLGVELNAQNCLCL
KSKNTKIKDEIFCVVDIESTGGIKSGQILEIGAVKIQNYKEIDRFESFIKVESIPENITE
LTGISLDMVENAPSLKTVLNDFKLFLKDSIFVAHNVRFDYHFISKAMYENDFGVLLNRRL
CTIDLAKKCIESPKYGLDALKDLLCIESKHHRALSDALAASEILKYCLKKIPFYIKTTEE
LLHFSKQAKSQIKK
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
ttgagccaacaacaaattgatgatctaatcatcaaattaagcaaagaaaacagacctttt
ccttgggttttaaaagaacttgcaaaaatagaagaattaaatcattatgattttgattta
tatatttttgagcttttagggcttggagtagaacttaatgcacaaaattgcttgtgttta
aaaagtaaaaatacaaaaataaaagatgagattttttgtgtagtagatattgaaagtact
ggtgggattaaaagtggtcaaattttagaaataggtgcggtaaaaattcaaaactataaa
gaaattgatagatttgagagttttataaaagtagaaagcatacctgaaaatattacagaa
ttaacagggattagtttggatatggtagaaaatgcaccttctttaaaaactgtgttaaat
gattttaaactgtttttaaaagatagtatttttgtagcacataatgtgcgttttgattat
cattttatatctaaagctatgtatgaaaatgattttggagtgcttttaaatagaagatta
tgcactattgatttagctaaaaagtgcattgaaagtccaaaatacggccttgatgcacta
aaggatttgttatgtattgaaagtaagcatcatagagctttaagtgatgctttggctgca
agtgaaattttaaaatattgtcttaaaaaaattcctttttatataaaaaccaccgaagaa
ttgttacattttagcaagcaagctaaaagtcaaataaaaaaataa
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