Campylobacter sp. RM16704: CAQ16704_1043
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Entry
CAQ16704_1043 CDS
T03560
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
camr
Campylobacter sp. RM16704
Pathway
camr03420
Nucleotide excision repair
camr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
camr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CAQ16704_1043
03430 Mismatch repair
CAQ16704_1043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
camr03400
]
CAQ16704_1043
Enzymes [BR:
camr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CAQ16704_1043
DNA repair and recombination proteins [BR:
camr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAQ16704_1043
MMR (mismatch excision repair)
Other MMR factors
CAQ16704_1043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
PcrA_UvrD_tudor
AAA_12
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AJC86498
LinkDB
All DBs
Position
1010979..1013042
Genome browser
AA seq
687 aa
AA seq
DB search
MNFFEGLNDSQKEAIMYIDGAMLILAGAGSGKTKTITTRLAYLIDHIGIPAQNTLTLTFT
NKAANVMKTRALALLQDQSLHNPLLCTFHKFGLLFLRLYSERISRANNFVIIDIDDKKKI
LKDLASENLQNSLASISAYISNFKNQSKSAQEIRKELEFLKDEKNKNYEEIIHLYEQYEH
FLIQNNFMDFDDLLMLTNKILEDEDFAKEQSKKYNYITVDEYQDTNALQYQILKKLCSSH
ENICVVGDDDQSIYGWRGAKIENILNFKEQFNNVKLVKLEQNYRSTSAILQAANELIEHN
RKRLGKTLICTKDKGEEITILQNDDEKIESFKVAREVSKLLNSGINPSEIAILYRVNALS
RALEEAFSKEKIPFKLLSGIRFYERAEIKDIISYLRLLSNLNDDYSFKRIINRPKRNFGN
VSLEKLENYAKENHLSLFESLCVLQGSGFFSKKTDNEIEKFILSIHKIKEKNDLLAMILA
LEEEFKIKEFYKDNPEAEDKLLNIDELYANLKDKISHGSYNGLDDILNEISLLNEQDGLD
KESICIMSIHASKGLEFEHIFIIGLEEGFFPLTSDTSNIEEERRLAYVAITRAKKKLYLS
YANSRFYKGSRTRLEKSRFFGESNVMKKELTLDCQKNSYKKGDLIKHKIFGIGRVTSVSK
IGNEEKLTINFGGIERMIMSNFVEKII
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaatttctttgaaggtttaaacgatagccaaaaagaagctatcatgtatattgatgga
gctatgcttatattagcaggtgcgggtagtgggaaaactaaaactatcactactagactt
gcttatttgattgatcatataggcattcctgcacaaaatacacttacattaacttttaca
aacaaagctgccaatgtaatgaaaacaagagcattagctcttttacaagatcaaagtttg
cataatccacttttatgtacttttcacaaatttggcctattgtttttaagattatatagc
gaaagaatttcaagagcaaacaattttgtcattatcgatatagatgataaaaagaaaatt
ttaaaagatttagctagtgaaaatttacaaaactctttagcaagcataagtgcttatatt
tcaaattttaaaaatcaaagtaaaagtgctcaagaaatacgcaaagaactagaattttta
aaagatgaaaaaaacaaaaattatgaagaaatcattcatctttatgaacaatatgagcat
tttttaatacaaaataattttatggattttgatgatttattaatgcttactaataaaatt
ttagaagatgaagattttgctaaagaacaaagcaaaaaatacaattacattacagtagat
gagtaccaagatacaaatgctttgcagtatcaaattctaaaaaaactttgctcatctcat
gaaaatatatgcgttgtgggtgatgatgatcaaagtatttatggttggcgtggagctaaa
atcgaaaatatcttaaattttaaagagcaatttaataatgttaaattagtaaaattagag
caaaactaccgctcaacaagtgctattttacaagctgcaaatgaacttatagagcataat
agaaaaagattaggtaaaacactaatttgcaccaaagacaaaggtgaagaaataaccatt
ttacaaaacgatgatgaaaaaatagaaagttttaaagttgcaagagaagtctcaaagctt
ttaaattcaggaataaaccctagcgaaatagccatactttatagagtaaatgcactatct
cgtgctcttgaagaagcatttagcaaagaaaaaattccttttaagttgctaagtggaatt
cgtttttatgaaagagccgagattaaagatattatttcatatttaagattactttcaaat
ttaaatgatgattattcttttaaacgcattattaatcgccctaaaagaaattttggcaat
gtaagtttagaaaaactagaaaattacgccaaggaaaatcatctgtccttatttgaaagc
ttatgtgttttacaaggaagtggattttttagcaaaaaaacagataatgaaatagaaaaa
tttatactaagtatacacaaaatcaaagaaaaaaatgacctacttgcaatgattttagct
ttagaggaagagtttaagattaaagaattttataaagataatccagaagctgaagataaa
cttttaaacatagatgagctttatgcaaatttaaaagataaaatttcacacggaagttat
aatggcttagatgatattttaaacgaaatttctttacttaatgaacaagatgggcttgat
aaagaaagtatttgtataatgagcattcacgctagtaaaggacttgaatttgaacatatt
tttattataggcttagaagaaggattttttccattaactagtgatacaagcaacatagaa
gaagaacgcagacttgcctatgtagcaatcactagagcaaagaaaaaactttacttaagt
tatgcaaattctagattttacaaaggaagtcgcacaagacttgaaaaaagtagatttttt
ggcgaaagcaatgtaatgaaaaaagaactaacactagattgccaaaagaattcttacaaa
aaaggggatttaatcaaacataaaatttttggcataggtagagtcactagtgtaagtaaa
ataggaaatgaagaaaaacttaccatcaattttggaggcatagaaagaatgataatgtca
aattttgtggaaaaaattatatga
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