Cyclobacterium amurskyense: CA2015_0431
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Entry
CA2015_0431 CDS
T03993
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
camu
Cyclobacterium amurskyense
Brite
KEGG Orthology (KO) [BR:
camu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
camu03016
]
CA2015_0431
Enzymes [BR:
camu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CA2015_0431
Transfer RNA biogenesis [BR:
camu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CA2015_0431
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AKP49902
UniProt:
A0A0H4PNT0
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All DBs
Position
complement(549185..549787)
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AA seq
200 aa
AA seq
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MIPLKISKEEVNALDLGAFPGKIILVEDEEGLREMEKDLNASRIIGFDTETRPAFRKGVS
YEVALLQLSTTKNAYLIRLNNTGFPPSAKAILENPRIVKVGAAVRDDLKALKKISPKFNP
DSFFDLNEELKRVGFLNVGVRNLSAMVLGIRISKSEQVSNWEAPVLTNKQMLYAATDAWA
CLEIFLKLQKEGYLDEIFST
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgataccattaaaaataagtaaagaagaagttaatgcattggacttgggagcttttcca
ggaaagataatattggttgaagatgaagagggccttcgtgaaatggagaaggatttgaat
gccagccggatcataggttttgatacagaaacaagaccggcatttagaaaaggggtaagt
tatgaggtggcattattgcagctttccaccaccaaaaatgcttacctgattcggctgaat
aatacaggttttccacctagtgccaaagcaattttggaaaaccctcgcattgtaaaagta
ggtgcggcagtaagggatgatttgaaagcattgaaaaaaatctctcctaaatttaatcca
gattcattttttgatttgaatgaagaattaaaaagagtaggattccttaacgtaggtgtt
agaaaccttagtgcgatggtattggggatccgaatttcaaaatctgaacaggtatcaaat
tgggaagcgccagtgctgaccaacaagcaaatgctgtatgcagccacagatgcctgggct
tgtttggagatttttctgaagctacaaaaagaaggctatttggatgagattttttctact
taa
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