Cyclobacterium amurskyense: CA2015_0644
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Entry
CA2015_0644 CDS
T03993
Name
(GenBank) TonB-dependent receptor
Organism
camu
Cyclobacterium amurskyense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Malectin
Big_7
Por_Secre_tail
Beta_helix
Big_3_5
XylC_M
Motif
Other DBs
NCBI-ProteinID:
AKP50108
UniProt:
A0A0H4PBE8
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All DBs
Position
804893..809473
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AA seq
1526 aa
AA seq
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MNSTLPKLVLCFSLILLSIKASATDYYFSNESGNDSRSTTQAQNPDTPWKSINKLNAIFG
SLKPGDAIYFKRGETFYGTIKATKSGSPGSPIKIDAYGSGAKPIITSFEKVSGWASIGNG
RYESTNTFPNYESNIVTINEQIYEKGRFPNSDGPNGGYLSVSSFSGNSSVSSNELSGAPN
FSNGEIVIRKNQWILDRHLIKSNSGSTINYHGSGAYNPTTGFGFFIQNHLSTLDKFGEWF
YNNSRKLNIYFGNTNPNNHTVRVATLENLLVKSYNVDHLLIQSLHFKGANKDAIYIGEGR
DVVINNTDIEFSGENGVTSLNIKELVIKNSRINYSLNTGLNLRYGNDNAIIRDNIIENSF
PFHGGGQNEDNNGNGIFVSGNNVLIENNIVKQTGFNGIHFNGNNISIKNNLIQKFCLLKN
DCGGIYTFGGNTVTNFSNRVIESNIIIDGFATNYGTPNYAKQNHHPQGSGIFLDDNVNNV
SLIKNTIANTTYSGLKASNVFNVSVKDNTFFNSYVQALVGNSERGTDTRNVTFSSNILFS
KHTDQHSYYINSYKDDIPSFGTFESNYFARPLGDNHSIYLSYYKDNKKYMEIKDLNNWKS
TFNKDKTSVTFIQDEFKQFSLKSFIGELLYDNLSFLKGINNFNCNDCTQSWDSNGILSGS
IKINSPGYSSALARIRSVEKSKTYVAKFKAKSNKTGNLRVVLRYAGTPWEIVSPATVVEL
GTEAKEYSVLLKPYANVSEPVIMFISDVGNWEYWIDDLEIREADVEITDPDNVFLFEYNA
TKSKKSISLDGTFKDVKGVSYTGSYQIEPYSSAILVRTSEATPPPPVSKPDIQQEVKITT
PSSNSSFELGEKIELIAEVTANQDNISKVAFYNGNQLIGNASEQPYKLSWGNGDAGNHQI
TAIVVNNNNTTVATSAQIAIKINAEIPDSETGNPIGDSYSLHLNIGSNDTKSYEGNTFIS
LGEADGSTGRSNSLELNTGEGSIFESISFNEDLEYKIPIPNGIYTVKTYHQEVHFGLNGV
SGSNGKRVFDVILEGQTKYKNLDLYALSKNQKVVLTHEDIEVKDGILNLNLIASANNAII
SGISIIEKGTAAPVESIEGAKFINVGGLKDEKYNGDLFVSDYIDKHFSSSGIYENIASSN
EPLFQTNRFSENLIYTIPVKNGTYRVKTYHIENYFGVSNPDTREGLRVFDIFMQNQLVKS
NLDLYATSGNQETVLVFNEIIVKNGELKIELKASVNNALLSGIAIIPMSGVSNPSEEDSF
FINVGSEADTKYNGVDFVSENSVGQIPSESNLYIVPSSSSDQLYQSNRYGRSLDYKFPVS
NGKYTVITYHNENYFGEITNTTGPNNRVFDIFIESVKVKGNVDLYIENTNRPVALRFENI
DVSDGVLNLNLNGVINNALLSGIAIFPSAKDNLGNTNLRQIIGEAEALSTLSEMREDGIQ
NTYENKLYPNPAVTSATLEIGKELGRFYISIHNMNGQRVDYFDSESIVNSEGKYEIPVHH
LKQGIYIITLSSEAEILERMRLAVTP
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcacattaccaaagctagtcctttgtttcagcttgatattattgagcataaag
gctagcgctacagattactatttttcaaacgaatcggggaatgattccagaagtaccaca
caagcacaaaatcccgacacaccctggaaatctattaacaaattaaatgccatttttggt
agtttaaagcctggagatgccatttattttaaaagaggtgaaactttctatggcacaata
aaggcaaccaaaagtggtagtcctggcagtcccattaaaatagacgcctatggatcaggg
gctaaacccataataacttcctttgaaaaggtgagcggctgggcatctataggaaatggt
aggtatgagagcacaaatacttttccaaattatgaatcaaacattgtaactataaatgaa
cagatttatgaaaagggtcgattcccaaatagcgacggaccaaatggtggctatttgagt
gtttcctctttttctggaaactcttcagttagcagcaatgaactgtcaggagcacctaac
ttcagtaatggtgagattgtcataagaaaaaatcaatggattttggataggcacctcatc
aagtccaattcaggttctactataaactaccatgggtctggagcatataaccctactaca
ggatttggatttttcattcaaaatcacctttccacacttgacaaattcggcgagtggttt
tataacaacagcagaaaattaaatatttattttggcaatactaacccaaacaatcacacc
gtccgagttgctacattagaaaaccttctcgtaaagtcttacaatgtagatcatttgttg
atacagagccttcactttaaaggtgccaataaagatgccatatatataggagaaggaagg
gatgtagtcattaacaatactgacattgaattttcaggagagaatggcgttacttcacta
aacatcaaggaattagttataaaaaatagtaggattaattactccttaaacacaggactt
aatttaaggtacggtaatgataatgctatcattcgggacaatattattgaaaacagtttt
ccatttcatggcggaggtcaaaacgaggataataacggcaatggaatatttgtatcaggt
aataatgtactcattgagaacaatattgtcaaacagactggatttaacgggattcatttt
aacggaaacaatatttctatcaagaacaatctaatacagaaattttgcctcttaaaaaat
gactgtggtggaatttacacttttggtggcaacacagttaccaacttcagcaaccgagtt
attgaaagtaacataataatagatggctttgctacaaattatggcacacccaattacgca
aaacaaaaccaccacccacaaggcagtggaatatttttagatgataatgtaaataatgtt
tccttaattaaaaacactattgcaaatacaacatattcaggacttaaagcatctaatgtt
ttcaatgtaagtgttaaggacaatacttttttcaattcttatgtccaagcattggtagga
aatagcgaaagaggaacagacacccgaaatgtgaccttttcaagcaatatactcttttca
aaacacactgaccaacactcttactacatcaattcttataaggatgacataccaagtttc
ggaacttttgagagcaattatttcgccagacctttaggtgacaaccacagtatttacctt
tcttattataaagacaataagaaatacatggaaatcaaagacctaaacaattggaaaagc
acttttaataaagacaaaacttccgttacatttatacaggatgaatttaaacaatttagc
cttaaaagttttataggggaattgctgtatgataatctatcttttctaaaaggcattaat
aattttaattgcaatgactgtacacaatcttgggattccaatggaattttgagcgggtcc
atcaaaatcaatagtccgggatattcctcagctctagcaagaattagaagtgttgaaaaa
agcaaaacttacgttgcgaaattcaaagccaaaagtaataaaactgggaaccttagagtc
gttttaagatatgctggaactccttgggaaattgtttctcccgctacggtagtagaatta
ggaactgaagcaaaagaatattcagttctattaaagccttacgccaatgtttctgaacca
gtaattatgtttatttctgatgttggaaattgggaatactggattgacgatttagaaata
agagaagcagatgtggaaataactgatcctgacaatgtatttctctttgaatacaatgct
actaaatcaaagaagtcaatttctttggatggaacatttaaagacgttaaaggtgtctct
tacactggttcctatcaaatagaaccttattcttctgccatattagtaagaacatcagag
gccactcctcctcctccagtctccaaacctgatattcaacaagaggtgaaaattactaca
ccaagttccaatagtagttttgaactcggagagaaaatagaactgatagccgaagtaacg
gctaatcaagacaacattagcaaggtcgctttctacaatggcaatcaacttattggtaat
gcttcagaacaaccctataagctcagctggggaaatggggatgcaggaaaccatcaaatt
acagcaattgttgtcaataacaacaacaccacggtagctacttcagctcaaatagctata
aaaataaatgctgaaatccctgattctgaaactggaaacccaatcggagactcttattcc
ttacacctaaacattggatcaaatgatacgaaatcctatgaaggaaatacgtttatttca
ttaggtgaagccgatgggtccactggtagatccaactccttagaattgaacactggagaa
ggtagcatttttgaatccatttcatttaatgaagatcttgagtataaaatccccatccct
aacggcatctatacggtaaaaacttaccatcaagaagttcactttgggcttaatggtgtc
tctggaagtaatggcaaaagggtatttgatgtgatccttgagggacaaaccaaatacaaa
aacctagatctgtacgccttaagtaaaaatcaaaaggtagtattaacccatgaagacatt
gaagttaaagacggcattttaaaccttaacttaattgcttctgcaaacaatgccattatc
tcaggcatctcaattatagagaaaggtacagcagcaccagtagaatccatagaaggtgca
aagtttataaatgtaggcggtcttaaagatgagaaatacaatggggacttatttgtctct
gattatattgacaaacatttctcatcatctggaatttatgaaaacattgcttcctctaat
gagcctttatttcaaaccaataggttttcagaaaacctgatctatacgatcccagtcaaa
aatggtacttatagagttaaaacttatcatatagaaaactattttggagtatctaaccct
gatacaagagaagggttaagggtatttgacatattcatgcaaaatcaactggtaaaaagt
aatcttgatctttatgctacaagtggaaatcaggaaactgttttggttttcaacgaaatt
atagtaaagaatggtgagcttaaaatcgaacttaaagcctctgttaacaacgccctttta
tcaggaatagcgatcatcccaatgagtggcgttagcaacccttcagaagaagattccttc
tttataaatgtgggaagcgaagcggataccaaatacaatggagttgactttgtctcagaa
aatagtgttgggcaaataccttctgaatcaaatctatacattgttccttcatcaagttca
gatcaattgtaccaatctaatcgttacgggagatcactagattataaattccctgtgtcg
aacgggaaatacacagttattacctaccataatgaaaattattttggtgagataactaat
acgacgggtccgaacaacagggtatttgacatctttattgaaagtgttaaagtaaaaggc
aatgtcgacctctacatagaaaacacaaatcgacccgttgctttacgatttgagaatatc
gacgtttcagacggcgttttaaacttaaatctcaatggagtaataaacaatgctttgcta
tccggaattgctattttcccaagtgctaaggataacctaggtaacacaaatctaagacag
ataattggcgaagctgaagcgttgtcaaccctaagcgaaatgagagaagatggaattcaa
aatacctatgaaaacaaactctatcctaatcctgctgtaacttcagctacccttgaaata
gggaaagagttagggagattttacataagcattcacaatatgaatggtcagcgagttgat
tattttgattcagagagcattgtcaattcagaaggaaaatatgaaatacctgttcaccac
ctgaaacaaggtatctatattattactctttcatcagaagctgaaatacttgaaaggatg
agactggctgtcacaccttaa
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integrated database retrieval system
