Cyclobacterium amurskyense: CA2015_1431
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Entry
CA2015_1431 CDS
T03993
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
camu
Cyclobacterium amurskyense
Pathway
camu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
camu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CA2015_1431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
camu03019
]
CA2015_1431
Enzymes [BR:
camu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CA2015_1431
Messenger RNA biogenesis [BR:
camu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CA2015_1431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ERCC3_RAD25_C
Utp25_C
Helicase_C_2
AAA_22
P-loop_SecA
CMS1
DUF3834
Cas3-like_C_2
DUF5612
HEM4
Motif
Other DBs
NCBI-ProteinID:
AKP50871
UniProt:
A0A0H4P8Q6
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All DBs
Position
1758802..1760034
Genome browser
AA seq
410 aa
AA seq
DB search
MTFEKLELISPILKALQERNYKEPTAIQEQAIPKILAKRDILGSAQTGTGKTAAFALPII
QLLHTEKNNDKGRLAIKSLIVTPTRELAIQIDENLEFYGKYTKLKHAVIFGGVKQGAQVN
EIRRGVDILVATPGRLLDLINQGFIKLDHIKIFVLDEADRMLDMGFINDIKKLLKLLPKK
RQSLFFSATMPDNIVSLADNILTDPVKIEVNPVSSAADTVKQKVYYTNKDAKKDLLFHIL
ENKDIDQVLLFSRTKHGADKITRNLKSKNINAAAIHGNKAQNHRQKVLSQFKEGTIRVLV
ATDIAARGIDIDKLQYVINYDVPEDPETYVHRIGRSGRAGESGTAISLCEPEENGYVRLI
ERLINQKITEVDNNPFPQTEKPMSALERKEFNKEKQRKKQAFFKNRKKSR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgacattcgaaaaattagaacttatatcccctatcctgaaagcacttcaggaaagaaac
tacaaggaacccactgccatacaagagcaggcaattccaaaaatcctcgcaaaaagagat
attttaggaagtgcacaaacaggtactggtaaaacagcagcctttgctcttcctatcatc
caactgctccacacggaaaaaaacaatgacaaaggaagattggccatcaagtcactcatc
gtcactccaacaagagaattggccattcagattgatgaaaatcttgaattttacggaaaa
tacacaaaattaaagcatgctgttatttttggcggtgtgaaacaaggcgctcaagtcaat
gaaatcagaaggggtgttgatattttagtagctactcccggcagattacttgaccttatt
aaccaaggttttataaaactggatcacatcaagatatttgttcttgatgaagcggaccgc
atgctggacatgggctttatcaatgacatcaaaaaacttttgaagttattgccaaagaaa
agacaatccttgtttttttccgcaaccatgccggacaatatcgtttcattggctgacaat
atccttacagatcctgtcaaaattgaagtaaaccctgtttcttctgccgctgatacagta
aaacagaaagtctattataccaataaggacgctaaaaaggacttgcttttccatatattg
gaaaacaaggatatcgatcaagtattgcttttctcccgaaccaaacatggtgcggacaag
atcacgcgaaacttaaaaagcaaaaacatcaatgccgcagccatacatggtaataaagcg
caaaatcatcgacaaaaagtcttgagtcaattcaaggaaggcaccattcgtgtacttgtt
gctactgatattgcggcccgaggtatagacatcgacaagctacagtacgtgatcaattat
gatgtgcccgaagatcctgagacctatgttcaccgaatcggtagatcaggaagagctgga
gaatctggaactgccatctctctttgcgaaccagaagaaaacgggtatgttcgcttgata
gaaagacttatcaaccaaaaaatcactgaggtagacaacaatccttttcctcaaactgag
aagccaatgtcagcattggaacgaaaagaatttaacaaggagaaacagcgtaaaaagcag
gcatttttcaaaaatagaaaaaagtctagataa
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