Cyclobacterium amurskyense: CA2015_1484
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Entry
CA2015_1484 CDS
T03993
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
camu
Cyclobacterium amurskyense
Pathway
camu03030
DNA replication
camu03430
Mismatch repair
camu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
camu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CA2015_1484
03430 Mismatch repair
CA2015_1484
03440 Homologous recombination
CA2015_1484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
camu03032
]
CA2015_1484
03400 DNA repair and recombination proteins [BR:
camu03400
]
CA2015_1484
Enzymes [BR:
camu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CA2015_1484
DNA replication proteins [BR:
camu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CA2015_1484
DNA repair and recombination proteins [BR:
camu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CA2015_1484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
DUF6956
Motif
Other DBs
NCBI-ProteinID:
AKP50922
UniProt:
A0A0H4PRM0
LinkDB
All DBs
Position
complement(1812323..1813000)
Genome browser
AA seq
225 aa
AA seq
DB search
MVDWKSIFGLQSLPKPGYIKAYEQTLTKKISKAKPISELDFLVLDTETTGLDVRKDYVLS
YGSVHVTNNRIKIPSSKEFYMRPKKRNKEAVKVHGLIQVRPYISREQLIRSFLEDAANKI
LVGHHLGFDLAMLEKVGKKLGLKKIKQPCLDTYELAVRLENGKYHDPHAIASQDYSLDKL
CERYKIPLDDRHTAAGDAMLTSQLLLKLLKMAEKKGIKTYGDLLS
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggtcgactggaaatctatttttgggcttcaatcgcttcccaaacctgggtacataaag
gcttatgagcagactttaacaaaaaagatttctaaggcaaaaccgatctccgaattggat
ttcttggttttggatacagaaactactggtttggatgttcggaaagattatgtgctttcc
tatggatcggtgcatgtgaccaataacaggataaaaatcccaagctcaaaagagttttac
atgcgaccaaagaaacgcaacaaagaagcagtaaaagtccatggtttgattcaagtaagg
ccttatataagccgggaacaactgatcagaagttttcttgaagatgccgccaataaaatt
ttggtggggcaccaccttggctttgacttggccatgctggaaaaagtgggaaaaaaactt
ggcctgaagaaaatcaagcagccttgcttggatacctacgagttggcggtcagattggaa
aatgggaaataccatgatccgcatgccatcgcttcacaggattattctttggacaagcta
tgtgagcggtacaaaatccccttggatgatagacatacggccgccggagatgccatgctt
acctcgcagctcttattaaaactcctgaaaatggcggagaaaaaaggaattaaaacctac
ggcgacctattgagctaa
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