Cyclobacterium amurskyense: CA2015_2544
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Entry
CA2015_2544 CDS
T03993
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
camu
Cyclobacterium amurskyense
Pathway
camu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
camu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CA2015_2544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
camu03021
]
CA2015_2544
03400 DNA repair and recombination proteins [BR:
camu03400
]
CA2015_2544
Enzymes [BR:
camu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CA2015_2544
Transcription machinery [BR:
camu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CA2015_2544
DNA repair and recombination proteins [BR:
camu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CA2015_2544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AKP51955
UniProt:
A0A0H4PFZ0
LinkDB
All DBs
Position
3057102..3058091
Genome browser
AA seq
329 aa
AA seq
DB search
MSILAFQMPEKVVMEKADDFHGLFTFKPLEKGYGVTIGNALRRILLSSLEGYAITAVKLP
GVVHEFSSIEGVVEDVTDIILNLKQVRFKKIHDAIDNKITVEVKNQDVFTAGDIAKYTTS
FEVLNPDLVICHLDNSKSLEIELSVDKGRGYLPAEESKPKEQIYGTISVDAVFTPIKNVK
YRIENTRVEQKTDYEQLIMEVSTDGSIHPEKALQESAKILIQHFMLFSDQTMVIDAPGSG
AIEPIDEEYLHMRKLLKTSLSDLDLSVRAYNCLKAADVKSLGDLAKLEISDMMKFRNFGK
KSLAELEQLIQEKGLTFGMDLSKYKLDEE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtccatattagcatttcaaatgccagagaaagtggtaatggaaaaagcagacgatttc
cacggactgtttacctttaagccacttgaaaaagggtacggggttaccatcggaaatgcc
ctcagaaggattcttttgtcttcactggaaggttatgctattactgccgtaaaattaccc
ggtgtagtgcatgagttttctagtattgagggagtggttgaagacgttacagatattatc
cttaacctaaaacaggtcaggttcaaaaaaatccatgatgccattgataataaaattaca
gtggaagttaaaaatcaggatgtttttaccgcaggagatattgccaaatacactacctct
tttgaagttttgaatcctgatttggtcatatgtcatttggataattcaaaaagcctagaa
attgaactttctgttgataaaggtaggggatatcttcctgcagaagaatccaaacctaag
gaacagatttacggtacgatctcggttgatgctgtttttacacctatcaaaaatgtaaaa
tacagaattgaaaataccagggtggagcaaaagactgattatgagcaattaatcatggag
gtcagcactgacgggtctatacatcccgaaaaagccttgcaagaatctgctaagatcttg
attcaacactttatgttgttttcagatcagactatggttatcgacgcgccaggaagtggt
gctatagagcctatagatgaagagtatctgcacatgagaaaattacttaagacatccttg
agtgatttagatctttctgtcagagcttacaattgtctgaaagccgccgatgttaagagt
ctaggagaccttgccaaacttgaaatttctgatatgatgaaatttagaaactttggtaag
aagtctttggcagaattggaacaacttatccaggaaaaaggcctgaccttcggtatggat
ctgtctaagtataaacttgatgaagaataa
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