Cyclobacterium amurskyense: CA2015_2573
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Entry
CA2015_2573 CDS
T03993
Name
(GenBank) WD40 repeat-containing protein
Organism
camu
Cyclobacterium amurskyense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_like
Beta-prop_EML
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
NBCH_WD40
Cytochrom_D1
Beta-prop_WDR75_1st
eIF2A
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_WDR19_1st
PQQ_3
Beta-prop_EIPR1
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_IFT122_2nd
Beta-prop_SPT8
CFAP43_N
KNTC1_N
Beta-prop_RSE1_2nd
Beta-prop_Nup120_160
PQQ_2
Beta-prop_LRRK2
Nbas_N
Beta-prop_HVO_0234
Beta-prop_ELP1_1st
LVIVD
Motif
Other DBs
NCBI-ProteinID:
AKP51984
UniProt:
A0A0H4PCM7
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All DBs
Position
3088443..3089351
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AA seq
302 aa
AA seq
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MSNIQVSKLNTLRGHNHSVFALAIGCLPHLIYTGSGDGMVVEWDLSRPGDGLLLAKLPSS
VYALEVDEQRNLLFIGQNNEGVHVVDLKSKKEIWSLKITSHSIFDIKVIDNLLLVATGDG
VLVVLDIDERSIVRHIKISDQSLRVLAVSPDKRQISVGASDNMVKVFDLENWKPLAKLQG
HIKSVFALSYSPDGKMLVSGGRDAQLKFWDPSNFEELRNIAAHMYAINYLSFREDGKYFV
TCSMDKSMKIWDSEAFKLLKVIDKARYVGHGTSINKVLWIKDQVVAISDDHTVSVWEINI
GQ
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatattcaagtaagtaaacttaacacattaagaggtcataatcattctgttttt
gcacttgccattggttgcttgccccaccttatatacactgggtcaggagatgggatggtg
gtggaatgggatctttctcgtcctggagatgggcttttattggctaaattgcccagttca
gtctatgctttggaagtagatgaacaaagaaatttgctatttattgggcagaataatgaa
ggggttcatgttgtcgacctaaagagtaaaaaggagatttggtctctaaaaatcacttcc
cattccatttttgatataaaagtaattgataatttattgttggtagccacaggggatggg
gtgttggtggttttggatatagacgaaagatctattgttcgccatattaaaatcagtgac
cagtctttacgcgtattggcagtttctccagataagcgtcagataagtgtaggtgccagc
gataatatggtaaaagtttttgatttagaaaattggaaaccattagcgaaattgcaggga
catataaaatcagtgtttgccttgtcttacagccctgatggaaaaatgcttgtaagtgga
ggaagagatgctcaacttaagttttgggatccttcgaattttgaagagctacggaatatt
gctgcacatatgtatgcaatcaattacctttcctttagagaggatggtaagtattttgtg
acttgtagtatggacaaatcaatgaaaatttgggattctgaggcattcaaattgttgaaa
gtaatagataaggcaaggtatgtaggtcatggaacctccatcaataaagttttgtggatt
aaagatcaagtagtagccatcagtgatgatcatactgtttctgtttgggagataaatatt
ggtcaataa
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