Cyclobacterium amurskyense: CA2015_2764
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Entry
CA2015_2764 CDS
T03993
Name
(GenBank) Putative helicase
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
camu
Cyclobacterium amurskyense
Brite
KEGG Orthology (KO) [BR:
camu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
camu03009
]
CA2015_2764
03012 Translation factors [BR:
camu03012
]
CA2015_2764
Enzymes [BR:
camu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CA2015_2764
5.6.2.5 RNA 5'-3' helicase
CA2015_2764
Ribosome biogenesis [BR:
camu03009
]
Eukaryotic type
Other ribosome biogenesis factors
CA2015_2764
Translation factors [BR:
camu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
CA2015_2764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
Viral_helicase1
AAA_19
PhoH
ResIII
DAP3
NAT10_TcmA_helicase
T2SSE
DEAD
AAA_22
nSTAND_NTPase5
SMUBP-2_HCS1_1B
UvrD-helicase
UvrD_C_2
AAA
nSTAND3
AAA_16
Seryl_tRNA_N
AAA_25
SLFN-g3_helicase
NB-ARC
DUF4709
Motif
Other DBs
NCBI-ProteinID:
AKP52174
UniProt:
A0A0H4PD46
LinkDB
All DBs
Position
3325082..3327007
Genome browser
AA seq
641 aa
AA seq
DB search
MTNITEELLYTKNLLQMEWVEDLAQFRSLTFRKSIKDKILAGVCWYPVHLNKVKWAFSDQ
LVIEISVNETTSNHGFHSGKSISLFSNAQENDIQSTYLNGVVNNVKGNVMTLSLNTETLP
DWVSEGRIGVNLMFDDTSYKVMMNTMDTLVASGNNRIAYLKEVLLGYEKPKIEEQGNQNN
PLLNEGQNKALELINNAKDLAIVHGPPGTGKTTTLIQAIVLATQQFDQVMVCAPSNAAVD
LLVERMDEAGVDVLRLGHPARVDENIIQRTLDARVMAHPSYKEYKKLKKAADEFRRKANK
FKRSFGHAEREDRKRNYNEAGRCQAEARQLYDYMTQSILSSCQVVACTLVGAATNLLKGT
FFQVVFLDEAAQGMEPATWIPILKAQKVVLAGDHFQLPPTIKSREAAKGLQNTLFEKAIS
NQPEAAQLLSLQYRMAEAIMGFSNSAFYNNQLQAAPNTKTHYLIENEPSMAFIDTAGSGF
MEFKDKETLSVSNKDEAKMALGLLKELIKKVGAKNREGQLWNVGLIAPYSAQVRMLKEML
ATESEWLFLKQMEQNLTISTVDGFQGQERDIMLISLTRSNPQGEIGFLADTRRMNVALTR
AKRKLIVLGDSATIGNNGFYQSFLDFVQEQGAYHSVYEFME
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatataactgaagaattattatatactaagaatcttttacaaatggaatgggtg
gaagatcttgcccaattcagaagtttgactttcaggaaatccataaaggacaaaattcta
gctggagtttgttggtatccagtgcatttgaataaggtaaaatgggcattttcagatcaa
ctggtcatagagatttctgtaaatgaaactacttctaatcatggatttcattctggtaaa
tccataagtttattttctaatgcccaagaaaatgacatccaatctacttatttaaatgga
gtagtgaataatgtgaaaggtaatgtgatgaccttaagtttgaatacggaaaccttgcct
gattgggtaagtgagggcagaataggcgttaatttgatgtttgatgacacttcatacaaa
gtaatgatgaacaccatggacacattggtggcatcaggaaacaacagaattgcttatctg
aaagaggtgcttttaggatatgaaaaaccaaaaatagaagaacaaggaaatcaaaacaat
cctcttttgaatgaagggcaaaacaaagctttggaacttattaataatgcaaaggacctg
gccattgttcatggaccgccaggtactggcaaaacaactacgcttatccaggcaattgtt
ctggctacacaacagtttgatcaggttatggtttgtgcaccaagtaatgctgcggttgat
ttattggtggagagaatggatgaggccggggtggatgttcttagattaggacacccggca
agggtagacgaaaatattattcagcgaacactggatgcacgtgtaatggcccacccttct
tataaagaatacaaaaaattaaaaaaagctgcagatgaattccgtcgcaaggccaataag
tttaagcggagttttggtcatgcagaaagggaagatcgtaaaagaaattataatgaagca
ggtcgttgtcaggctgaagctaggcagctttatgattacatgacccagtcaatcctttct
tcttgtcaggtagtggcatgtactcttgtgggggcagcaactaacctactcaaaggaacg
ttttttcaggttgttttcttagatgaagcagctcagggcatggaacctgctacctggatc
ccgattttgaaagcccaaaaggttgttttggcaggggatcactttcaactacctcctacc
ataaaatccagagaagcggccaaaggactgcagaataccctgtttgagaaagccatttcc
aatcaacccgaagcggctcagttgctgtctctgcaatacagaatggctgaggcaattatg
ggtttttctaattccgccttttataataatcagctacaagcagcgcctaatactaaaact
cattatttaatagagaatgaaccctcaatggcatttatagacactgccggtagtgggttt
atggagtttaaggataaggagacacttagtgttagcaataaggatgaagctaagatggca
ctcggccttttaaaagaacttattaaaaaagtaggcgcaaaaaacagagagggccaactt
tggaacgtaggacttatcgctccgtatagtgcacaggttagaatgttaaaggagatgtta
gccacagaatcggaatggttgtttttaaaacaaatggaacaaaatttgactattagcacc
gtagatgggtttcaagggcaggagcgtgatattatgcttataagcctcactagatccaac
ccacaaggtgaaatcggttttttggcagatacccgaagaatgaacgttgccttaactaga
gccaaaagaaaattaattgtacttggagacagtgccaccataggtaacaatggtttttac
cagtcctttctggattttgttcaagaacagggggcctatcacagtgtttatgaatttatg
gaataa
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