Cyclobacterium amurskyense: CA2015_3437
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Entry
CA2015_3437 CDS
T03993
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
camu
Cyclobacterium amurskyense
Pathway
camu03030
DNA replication
camu03430
Mismatch repair
camu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
camu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CA2015_3437
03430 Mismatch repair
CA2015_3437
03440 Homologous recombination
CA2015_3437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
camu03032
]
CA2015_3437
03400 DNA repair and recombination proteins [BR:
camu03400
]
CA2015_3437
Enzymes [BR:
camu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CA2015_3437
DNA replication proteins [BR:
camu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CA2015_3437
DNA repair and recombination proteins [BR:
camu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CA2015_3437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
RNase_H_2
LPG_synthase_C
Motif
Other DBs
NCBI-ProteinID:
AKP52826
UniProt:
A0A0H4PEB8
LinkDB
All DBs
Position
4181971..4183377
Genome browser
AA seq
468 aa
AA seq
DB search
MFFLSIVFTYELFMYAIVDIETTGGFTGNNKIIEIAVVFHDGEKITGQYEQLLDPEMHVP
GFITGLTGIDSQMLEGAPTFADISDELFDLLEDKVFVAHNVGFDYSFVKQAFEREGKVYK
PKRLCTVRLSRKIFPGLKSYSLGRLCESRGITVNDRHRAMGDAWATSILFGQLLEADHED
HIGQAIKGKHKALTLPPNISKEQFNEIPQSTGVYYFHDANGKVIYVGKAVNIQSRFNGHF
TGKAKLSLKSEICDVSYEVTGSELLALLLEAMEIKRLWPKYNRSLKVKAMSWGIFSYTDR
EGYTRFQINKIVPGIKPLATFTSHASGWKFLVEKNQEYQLCPKLNGIQKKNGACYDFQVG
ECNGACCGKELPEVYNERADEVFAAVKMEGERFLVKDIGRNPEEEVALLFEDGFLSAYGF
LDLNMSYQSSEEVISALKPVKRVVETRYLLKSFWDKIPENNIVYLENS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
ttgttttttctgagtattgtttttacttatgagttatttatgtacgcaatagtagatatt
gaaactacgggaggatttactggtaataacaagattatcgagattgccgtggtttttcat
gatggtgagaaaattaccgggcaatatgagcaattgttggatccggaaatgcatgtgcct
ggttttatcacagggctcacaggcatagactcacagatgcttgaaggagcacctactttt
gcagatatttctgatgaactttttgacttattagaagataaggtatttgtcgctcataat
gtaggctttgattatagctttgttaagcaggcatttgaaagagaaggaaaagtgtacaaa
cccaaacgcctgtgtactgtaagattaagtaggaaaatttttcctgggcttaaaagttat
agcctgggtcgtctatgtgaatcaagaggaatcaccgtgaatgatcgtcaccgcgctatg
ggtgatgcatgggccacatctatattgtttggccaacttctggaggcagatcatgaggac
catattggtcaagccataaaaggcaagcacaaggcattaaccctacctcccaatatcagc
aaagaacagtttaatgaaatcccacaatctacaggggtgtattattttcatgatgccaac
gggaaagtgatctatgtaggcaaagcagtgaacatacaaagtcgcttcaatggacacttt
acaggtaaagctaagttgagtttaaaaagtgagatatgtgacgtaagttatgaagttaca
ggaagtgagttactggcattgttgttagaggccatggaaatcaaaaggctgtggccaaag
tacaacaggtcgctaaaagtaaaagccatgtcttggggtattttctcctatacggacagg
gaaggttacactcggtttcaaatcaataagattgtacccggaattaagcctttagctaca
tttaccagccatgccagtggttggaaattcttagtagaaaaaaaccaggaataccagctt
tgcccaaaacttaatggaatacaaaaaaagaatggagcctgttatgattttcaagtaggt
gaatgcaatggggcctgctgtggcaaagaattgcctgaagtttataacgaaagagccgat
gaagtttttgctgctgtgaaaatggaaggagaaaggttcttggtgaaagatataggtaga
aatcccgaagaagaggtcgcattgctttttgaagatggttttctttctgcctatggtttt
ttggacttaaacatgtcctatcaatcctccgaagaagtgatctctgcactaaaacctgtt
aaaagagtggttgagactcgttatttactgaaatccttttgggataaaatacctgaaaac
aatatagtttatttagaaaatagttga
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