Cyclobacterium amurskyense: CA2015_4323
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Entry
CA2015_4323 CDS
T03993
Name
(GenBank) Primosomal protein N
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
camu
Cyclobacterium amurskyense
Pathway
camu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
camu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CA2015_4323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
camu03400
]
CA2015_4323
Enzymes [BR:
camu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CA2015_4323
DNA repair and recombination proteins [BR:
camu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CA2015_4323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
PriA_C
Zn_ribbon_PriA
nSTAND3
PIF1
AAA_30
AAA_19
Sigma54_activat
nSTAND6
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
AKP53668
UniProt:
A0A0H4PKX8
LinkDB
All DBs
Position
complement(5354001..5356514)
Genome browser
AA seq
837 aa
AA seq
DB search
MDDLFGNNYPLTSKNLFADIILPVPIPQTFTYSVGPEIQDEIGIGYRVMVQFGRKRILTG
IVAKVHQKAPEAYQAKAILDLLDDFPIVNALQIKFWAWLASYYCCHLGEVMNAALPSGLK
LSTESKIQMHPDFDLDNPDYPMDDREMLILEALEKKEEMNVDQLDTLVPVKDLHKLIKSL
LAKKAILVYESVKEKYSPKIELRVRLAQEYITASDKLNELFDGIKGKVKQENVLLKYLQQ
VPIYQKSELNKQGLAKKILTDAGCSPSSIDTLIKNKVLESFKVKISRFDPINIDENPILL
SDDQKEAYDAVQNEFNSKSTVLLHGITGSGKTEIYIKLIMEVLESGSQVLLLLPEIALTT
HLVSRLQKVFGDKMGIFHSKYSDNERVEVWQGVISGKYNFIIGVRSSLFLPFDSLGLVIV
DEEHEPSYKQYDPAPRFHARDAAIMMAYLHQAKTVLGTATPAFETFSNVQNDKYGYVKMD
KRYGNAELPHFHLADILKDKKKNLLKLDFTRLLREKIQEALNNQEQVLIFQNRRGYAPYI
SCDECGWIPECEHCDVSLTYHQFQEELRCHYCGFKDVVPKKCHACGSDKITTVGSGTERI
EENLSLLFPEARILRMDLDTTRSKYGYQKILEEFGSGNVDILVGTQMITKGLDFDRVSLV
GIVDADRILFYPDFRSGERAFQQITQVAGRAGRRNKTGNVIIQTRRPDQLIFNQIISGDY
AEFYRQEMGERKQFYYPPFVKNIKIVVKHKDFKTAETASVQLKNLLSDIEGRKIILGPEK
ALIGKIKNLYLFEIWIKLEKSTNAQVRFKQEMTRSISDLQSDKRFRSVRFLVDVDPF
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
gtggatgatctctttggaaataactaccccttaacaagcaaaaatctgtttgcggacatt
attttgcctgtacctattcctcaaacttttacttatagtgtggggcctgagattcaggat
gaaattggcattggctatcgtgtgatggtacaattcggtaggaaaaggattttaactggt
attgttgccaaggttcatcaaaaagcgcctgaggcttatcaggccaaagctatacttgat
ttattagatgatttccccatagtaaacgccttgcaaatcaaattttgggcttggctggcc
agctattattgttgtcatttaggagaagtgatgaatgccgctttacccagtggtttaaag
ctatctactgagagtaagattcaaatgcatcctgattttgacttggacaatccagattat
cctatggatgacagggaaatgctgatattggaggctttggaaaagaaggaggaaatgaat
gtggatcaactggataccctggttccagtgaaagaccttcacaagttgattaaaagtctt
cttgctaagaaagccatcttggtttatgaatctgttaaagagaaatacagcccaaagata
gaacttagggtgaggctagctcaagaatacattactgcatcggataagctaaatgaactt
tttgatggaataaaagggaaagtaaagcaagagaatgtgcttctcaaatatttacaacaa
gttcctatttaccagaaaagtgagctaaacaaacaaggactggccaaaaagattttgacc
gatgcaggttgttctccttcttccattgatacccttattaaaaataaggtattggaaagc
ttcaaggtaaaaataagtcgttttgacccaattaatattgatgaaaatccaattctactt
tctgatgatcaaaaggaagcgtatgatgcggtgcaaaatgaatttaacagtaaatccaca
gttttacttcatggtattacaggatctggtaaaacagagatttacattaagctaataatg
gaggtcctggaaagtggttcacaggtattattgctgcttcctgaaattgcacttactact
catttggtttctcggctacagaaagtttttggtgataaaatgggtatttttcactctaaa
tattcagacaatgaacgtgtagaagtgtggcaaggagtgatttcagggaagtacaatttc
attataggagtcagatcttctttattcttacctttcgatagcttgggtttggtcattgta
gatgaagaacatgaaccttcctataaacagtatgaccctgcgccaaggtttcatgcaaga
gatgctgcaatcatgatggcatatctacaccaagccaaaacggtcttaggaacagctacc
ccagcttttgagaccttttctaatgttcaaaatgataagtatggctatgtgaaaatggat
aaacgttatggcaatgcggaattgcctcattttcatttggcagacattttaaaggacaaa
aagaaaaacctgcttaaattagactttaccagacttctgagagagaaaatccaagaggcc
ctaaacaatcaggaacaagtattaatatttcaaaataggagaggctatgccccatatatt
tcctgtgatgaatgtggttggattcctgaatgcgaacactgtgatgtcagtttaacttac
caccaatttcaggaagaattgagatgtcactattgtgggtttaaagatgttgttccaaaa
aaatgccatgcctgtggtagtgataagattacaaccgtaggttcaggaacggaaaggatt
gaagaaaatctctcattactttttcctgaagcccgaattttaagaatggatttggacact
acccgaagtaaatatgggtaccaaaagattttagaagaattcggatctggaaatgtggat
attttggtaggaacccagatgattaccaaaggtctggattttgatagggtgtctctggta
ggaattgttgatgctgatcgaattttgttttacccagatttccgctcaggagaaagggct
tttcaacaaattacacaagtggctggaagggctggtaggagaaataaaacaggtaatgta
attattcaaacaagacgacctgatcaattgattttcaatcagataataagtggtgattac
gctgaattttatcgacaggagatgggagaacggaagcagttttattatcctccttttgtc
aagaatatcaagatcgtagtcaagcataaagactttaagacagcagaaactgcatctgtt
caattaaaaaatttactttcagacattgaaggaaggaagataattctaggtccggaaaaa
gcattaataggtaagattaaaaacttatatctttttgaaatctggatcaaactcgaaaaa
agcaccaatgcacaagtgcgttttaaacaggagatgacccgttccatttcagacctgcaa
tcagacaaacgctttcgttcagttaggtttttagtggatgtggatcctttttaa
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integrated database retrieval system
