Cyclobacterium amurskyense: CA2015_4824
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Entry
CA2015_4824 CDS
T03993
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
camu
Cyclobacterium amurskyense
Brite
KEGG Orthology (KO) [BR:
camu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
camu03032
]
CA2015_4824
03400 DNA repair and recombination proteins [BR:
camu03400
]
CA2015_4824
Enzymes [BR:
camu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CA2015_4824
DNA replication proteins [BR:
camu03032
]
Prokaryotic type
DNA Topoisomerases
CA2015_4824
DNA repair and recombination proteins [BR:
camu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CA2015_4824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
TNP-like_RNaseH_N
MksE
Motif
Other DBs
NCBI-ProteinID:
AKP54147
UniProt:
A0A0H4Q0J1
LinkDB
All DBs
Position
6014236..6015246
Genome browser
AA seq
336 aa
AA seq
DB search
MDTIREIDDSALCIFRKKWARGFRFIDENGKVIKDKKKLKRLKNLVIPPMWEEVRICRFE
DGHIQATGRDKKGRKQYIYHSIYEQKCQEEKFNKMSSFAMALPGIRKKAYKALKAKEWNK
TKVLGLMVLILDEYGIRIGNKYYQSSNETIGLTTLRRKHMKIEGDGLVFHYTGKSKIERK
VLIDDAELIKLIKESAELPGYEIFRYQDESGNFQAVDSDEVNQFINENMGEEYSSKYFRT
WAACRLAVEYYPKAWKELKKSKRKKFSNILIKMVASELGNTPTVCKNYYVHPAIFNEIDQ
QTLPNPNPFKPTKSLYNLSNSEKLALKIIEKASSEK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggatacaatcagagaaatagatgattcagcgctctgcatttttagaaagaaatgggct
cggggattcagattcattgatgaaaatgggaaagttattaaggataaaaagaaattaaaa
cggctaaaaaaccttgtaatccctcccatgtgggaagaagtaaggatttgtcgctttgag
gatgggcacatacaagctactggaagagacaaaaaaggcagaaagcaatacatctaccat
tctatctatgaacaaaaatgccaagaagagaaattcaataaaatgtccagtttcgcaatg
gcattacctggaatccgtaaaaaggcctataaagctttaaaagcaaaggaatggaataaa
acaaaagtacttggactgatggtattgatcctggatgaatatggaatccgaattggaaat
aaatactatcaatccagtaatgaaaccattgggttgacgaccttgcgaagaaagcacatg
aaaatcgaaggtgatgggcttgtatttcattatactggaaaaagtaaaattgaacgtaaa
gtgttgatagacgatgctgaactaattaaattaataaaggaatcagcagagcttcctggg
tatgaaatatttcgttaccaggatgaatccggaaatttccaagctgtagacagtgatgaa
gtaaatcagtttattaatgaaaatatgggcgaagagtattctagtaaatactttcgtact
tgggcagcctgcaggttagctgtagaatattaccctaaagcatggaaagaacttaaaaaa
tcaaagcgcaagaaatttagcaatatccttataaaaatggtggcttcagaattgggcaac
actcctacggtttgtaaaaactattacgtacacccggctatttttaatgaaattgatcaa
caaaccctgcctaatcctaatccattcaaaccaacaaagagtctctataacttatctaat
agcgaaaaactcgccctaaaaattattgaaaaagcctcctccgaaaagtga
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