Campylobacter sp. VBCF_01 NA2: PF027_05305
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Entry
PF027_05305 CDS
T11731
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
camv Campylobacter sp. VBCF_01 NA2
Pathway
camv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
camv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PF027_05305 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
camv03021
]
PF027_05305 (rho)
03019 Messenger RNA biogenesis [BR:
camv03019
]
PF027_05305 (rho)
Transcription machinery [BR:
camv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PF027_05305 (rho)
Messenger RNA biogenesis [BR:
camv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PF027_05305 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
ATPase_2
AAA_22
AAA_25
AAA
Mor
Motif
Other DBs
NCBI-ProteinID:
WBR53750
LinkDB
All DBs
Position
complement(1027114..1028469)
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AA seq
451 aa
AA seq
DB search
MENTKENSTQQTQTAPQAPNHTKKVHAKTHVPVEGYQIEELRAMDLENLVAIADELGVEN
SREFRRQELVFEILRMQTKQGGFILFTGILEVTPEGYGFLRGIDSNLSDSANDAYVSLSQ
IRKFALRVGDIVTGQVREPKDQEKYYALLKIEAINYKSIQEARERPLFDNLTPLFPTEKL
QLEYDPMKLTGRVLDLFTPIGKGQRALITAPPRTGKTELMKELANGITRNHPEVELLVLL
VDERPEEVTDMERSVRGEVFSSTFDQPAFNHVRVAELVIEKAKRAVEIGKDVVILLDSIT
RLARAYNTVTPASGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIVATALIETGSRMD
DVIFEEFKGTGNSEIILDRNISDRRIYPAINITKSGTRKEELLQGAQNLQKIWAIRSVVS
TMDDVEALKFLYPKILKTKNNAELLSIMNEQ
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacactaaggaaaattcaacccaacaaacccaaaccgccccacaagcaccaaat
cacacgaaaaaagttcatgctaaaactcatgtcccagtagagggatatcaaatcgaagag
cttcgcgctatggatttagaaaaccttgtcgcaatcgctgatgagctaggtgtggaaaat
tctcgcgaatttcgccgccaagagctcgtgtttgagatacttcgcatgcagacaaaacag
ggcggatttattttatttactggaattttagaggttacgcctgagggatacggctttttg
cgaggaatcgactcaaaccttagcgacagcgcaaatgacgcttatgtcagcctaagccaa
attcgcaaatttgcccttcgtgtgggcgatatcgttacaggacaggtcagagaaccaaaa
gatcaagagaaatattacgcgcttttaaaaatcgaagcgattaattacaaatcaatccaa
gaagccagagaaagaccgctttttgataatctaactccgctttttccaactgaaaaatta
cagctcgaatacgatccaatgaagctaactggtcgtgtgctagatctttttacgccgatt
ggcaagggtcagcgtgcgctcatcacagctccgcctcgcacaggtaaaactgagcttatg
aaggagctggcaaacggaattacgagaaatcacccagaggtcgagcttttggtgcttttg
gtagatgaaagaccagaagaggttaccgatatggagcgcagtgtgcgtggtgaggtgttt
agctcgactttcgatcagcctgcgtttaaccatgtgcgcgtggctgaactcgtgatcgaa
aaggcaaaacgcgccgtcgaaattggcaaagatgtggtgattttgctcgatagcattact
cgccttgcgcgcgcttacaacaccgtaaccccagctagcggtaaggtgctaagcggtggt
gtcgatgccaacgcacttcacaaaccaaaacgcttttttggagcggcgcgaaatatcgaa
aacggcggatcgcttactatcgtggcgactgcgctaattgaaactggatctcgtatggac
gatgtgattttcgaggagttcaaaggcaccggaaatagcgagattatcctagatagaaat
atcagcgatcgccgaatttacccagcgattaatatcacaaaatcaggcacgagaaaagaa
gagttgctccaaggtgcgcaaaatttgcagaaaatttgggctattcgttctgtggtctct
actatggacgatgtcgaggcactgaaatttttatacccaaaaatcctaaaaaccaaaaac
aacgcagaacttttatcgattatgaacgagcagtag
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