Campylobacter porcelli: CSUIS_0051
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Entry
CSUIS_0051 CDS
T05900
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
camy
Campylobacter porcelli
Brite
KEGG Orthology (KO) [BR:
camy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
camy03032
]
CSUIS_0051 (topA)
03400 DNA repair and recombination proteins [BR:
camy03400
]
CSUIS_0051 (topA)
Enzymes [BR:
camy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CSUIS_0051 (topA)
DNA replication proteins [BR:
camy03032
]
Prokaryotic type
DNA Topoisomerases
CSUIS_0051 (topA)
DNA repair and recombination proteins [BR:
camy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CSUIS_0051 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DNA_ligase_ZBD
DUF1272
Zn_ribbon_TFIIB
Toprim_4
ADK_lid
O-FucT
Zn_ribbon_8
Toprim_2
Lar_restr_allev
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
ARQ99907
UniProt:
A0A1X9SUG4
LinkDB
All DBs
Position
49124..51208
Genome browser
AA seq
694 aa
AA seq
DB search
MSKLIIVESPAKAKTIKNFLSSEYKVIASKGHIRDLPKSSFGIKIEGDKFTPEYRISSDH
SAIVKEIKELAKSADTIYLATDEDREGEAIAYHIATAIGKRPETLPRIVFHEITKSAIEA
ALANPRELDMNSVNAQQARRLLDRIVGYKLSPLLNIKIQRGLSAGRVQSSALKILVDRER
EIREFKSIEYFSIDTKFKDDLEAELIEFQGSKIEKLTITNPQRAQYILDILKADKFKISD
IESKERKTSPQPPFMTSTLQQSASNRLGFSPKKTMMLAQTLYEGVQTNSGFMGAITYMRT
DSLNLAKEAVEAARKLIKSEFGDKYLPSKAQIYATKSKGAQEAHEAIRPTNLSFTPDIAA
KFLDKDLLKLYTLIYNRFLASQMNPSISQTQNIIIKSDNSKFKLSGRKVIFDGFYKVYGD
IDKDIVLPSLNIGDDLSVQSMQSSSHFTEPPSRYSEAGLVKKLESLGIGRPSTYAPTISL
LTSRDYVKVEKKQLIPNDIAFTMTSVLEEHFNDIVDSEFTSKMEKKLDDIAENKANWQEV
LSSFYNPFIQKINDGKTNIKSQKVAEPIGEKCPECGGELVKRKGRFGEFIACLNFPKCKY
SRNLGKSDKLEKKEPAKIGIKCPECGGELVERFGKKGKFYGCLNYPKCNFISKYKPAGKN
CPSCNAPMILKELKKGDFNECLQCKFKEEVKDDK
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagttaataatagttgaatctccagctaaagctaaaactataaaaaatttctta
agttctgagtataaggttatagctagtaaagggcatattagagacttgcctaaatctagc
tttggcattaagatagaaggggataaatttactccagagtataggattagcagcgaccac
tccgctatagtaaaagagattaaagagcttgctaagagtgctgataccatctatcttgcg
accgatgaggatagagagggcgaggcgattgcttatcatatcgcaacagcaattggtaaa
aggcctgaaactctacctagaatagtctttcacgaaatcacaaagagtgccattgaagca
gctctagctaatcctagagagctagatatgaatagcgtaaatgcacaacaagcaagaaga
cttctagatagaatagtaggatataagctaagtccgcttttaaatatcaaaattcaaagg
ggcctaagtgctggacgcgtccaaagctcagctcttaaaattttagttgatcgtgagcga
gagataagggaatttaaaagcattgaatactttagcattgatactaaatttaaagatgat
ttagaagctgagcttatcgaatttcaaggctcaaaaatagaaaaactcactataaccaac
cctcaaagggctcaatatattttagatattttaaaagcagataaatttaaaattagcgat
attgaatccaaagagagaaaaactagcccacaaccgccttttatgacttcaactcttcag
caaagtgcgtcaaataggcttggctttagccctaaaaagactatgatgttagcccaaact
ctatatgaaggtgtgcagacaaatagtggatttatgggtgctataacctatatgagaact
gatagtttaaatttagccaaagaagcagtagaagctgcaaggaagcttataaagagcgaa
tttggtgataaatacttgccatcaaaggctcaaatatatgcgactaaaagcaagggcgct
caagaggctcatgaagccattcgaccgacaaatttgagctttactcctgatattgctgct
aaatttttagataaagatcttttaaagctttacacccttatctataatagatttttagcc
tcccagatgaatcctagcatatctcaaacgcaaaatatcatcataaaaagcgataattct
aaatttaaactctcaggcagaaaggtgatatttgatggattttataaggtttatggcgat
atagacaaggatatagtcttgccatctttaaatatcggcgatgatttaagcgtccaaagt
atgcaaagcagtagccattttaccgagccacctagtcgctactctgaggctggactggta
aaaaagctagagagtcttgggattggcagacctagcacctatgcgccgactatttcgctt
ttaacaagccgtgattatgtaaaagtagagaaaaagcagctaataccaaatgatattgca
tttaccatgacttcggtgcttgaagagcattttaatgatattgtagatagcgaatttact
tctaaaatggagaaaaagcttgatgatattgctgagaataaagccaattggcaagaggtg
ctatctagcttttataacccttttatccaaaaaatcaatgatggaaagacaaatataaaa
agccaaaaagtagccgaaccaataggcgagaaatgccctgaatgcggtggggagctagtt
aagagaaagggtagatttggcgagtttatagcctgtttaaatttcccaaaatgtaaatat
agtagaaatttgggtaaatctgataaattagagaaaaaagaacccgctaaaataggtata
aaatgccctgaatgcggtggtgaattggtagagagatttggaaaaaaagggaaattttat
ggctgtttaaactatccaaaatgtaattttataagcaaatataaaccagctggcaagaat
tgcccaagttgcaacgctcctatgatcttaaaagagttaaaaaaaggcgattttaacgag
tgtttgcagtgtaaatttaaagaagaggtgaaagatgacaaataa
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